Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 seq5 95.1 1e-14 >seq2 Length=1698977 Score = 116 bits (128), Expect = 3e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 106248 AAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAA 106307 |||| |||||||||||||| ||||| || || || || || |||||||| || ||||| Sbjct 908816 AAGACATTAAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAA 908875 Query 106308 ACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTG 106367 ||| | || || ||| | | ||||| || || || || ||||| | Sbjct 908876 GTTGAATCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATT 908935 Query 106368 CCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATG 106427 || || |||||||| | |||| |||||| || ||||||||||| | |||| | Sbjct 908936 CCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTA 908995 Query 106428 GGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| |||||||| ||||| ||||||||||| || ||||| ||||| || |||| || Sbjct 908996 TCCGACTACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 909054 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || ||||| ||||| ||||| || ||||| ||| | Sbjct 909056 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 909115 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | ||||| || ||| ||||| ||||| | || || ||| Sbjct 909116 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909175 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| ||| || |||||||||||||| | |||| | ||| |||||| Sbjct 909176 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909235 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||||||||| || ||||| ||||| || |||| || Sbjct 909236 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 909282 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || ||||| || ||||| || || ||||| ||| | Sbjct 909284 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAGACTATCACTTTGGAAGTCGAATCTTCT 909343 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | ||||| || ||| ||||| ||||| | || || ||| Sbjct 909344 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909403 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| ||| || || ||||||||||| | |||| | ||| |||||| Sbjct 909404 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909463 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| ||||| ||||| || || || |||||||| ||||||| Sbjct 909464 ATCCAAAAGGAATCCACACTCCACTTGGTCTTGAGGTTGAGAGGAGG 909510 >seq5 Length=1351113 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || || || | ||||| ||||| |||||| ||||| ||| | | Sbjct 1192624 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1192683 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || || || || ||||| ||||| | || || ||| Sbjct 1192684 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1192743 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | ||| || || ||||| |||||| || |||| || || |||||| Sbjct 1192744 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1192803 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| |||||||| || || || || ||||| || |||| || Sbjct 1192804 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1192850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329560772864