Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 7e-24
seq3 120 3e-22
seq5 116 4e-21
>seq2
Length=1698977
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | ||| || || ||||||||||||||||||||||||
Sbjct 909282 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGAT 909223
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || | ||||| || ||||||||||| | || || || || ||
Sbjct 909222 AGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 909163
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || || || ||| | ||||| || ||||| ||
Sbjct 909162 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACT 909103
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||| || || ||||| || ||||| ||||||||
Sbjct 909102 TCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|||||||| | | ||| || | ||| || |||||||||||||| ||||||||||||
Sbjct 909510 CCTCCTCTCAACCTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGAT 909451
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || | || || || ||||||||||| | || || || || ||
Sbjct 909450 AGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGA 909391
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || || || ||| | ||||| || ||||| ||
Sbjct 909390 ATACCTTCCTTGTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACT 909331
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| || || ||||| || ||||| || ||||| ||||||||
Sbjct 909330 TCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284
Score = 113 bits (124), Expect = 5e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | ||| || || ||||||||||| ||||||||||||
Sbjct 909054 CCACCTCTCAATCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGAT 908995
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || ||| || | || || || ||||||||||| | || || || || ||
Sbjct 908994 AGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGA 908935
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || || || ||| | ||||| || ||||| ||
Sbjct 908934 ATACCTTCCTTATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACT 908875
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| | ||| ||||| ||||| ||||| || || || || |||||||||||
Sbjct 908874 TCCAAAGTGATGGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 908825
>seq3
Length=1603786
Score = 120 bits (132), Expect = 3e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| |||| ||| || | ||| || |||||||||||||| ||||||||||| | |
Sbjct 1548431 CCACCTCTTAGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 1548490
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | ||| || | || || || ||||| ||||| | || || || || ||
Sbjct 1548491 AAAGTTCT-ACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1548549
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 1548550 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGAC 1548609
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || || || || ||||||
Sbjct 1548610 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAA 1548649
>seq5
Length=1351113
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| || || ||||||||||| ||||||||||| | |
Sbjct 1192850 CCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGAC 1192791
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || ||||| ||||| | || || || || ||
Sbjct 1192790 AAAGTTCTACCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGG 1192732
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || || ||||| ||| | |||||||| ||||| ||
Sbjct 1192731 AATACCTTCCTTGTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 1192672
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||| || ||||| |||| || || ||||||||||||||
Sbjct 1192671 TTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398349460160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |