Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 4e-32
>seq3
Length=1603786
Score = 152 bits (168), Expect = 4e-32
Identities = 303/441 (69%), Gaps = 12/441 (3%)
Strand=Plus/Plus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
|| || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | ||
Sbjct 1186430 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 1186489
Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466
| | | | | | ||| ||||| ||||| || ||||| |||||| | | ||||||
Sbjct 1186490 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 1186548
Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526
||| || || ||||||||| | || ||||| || ||||| | |||| | ||
Sbjct 1186549 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 1186608
Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585
| | |||| | | || ||| ||||||||||| || | ||||||||||| | | |
Sbjct 1186609 A-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 1186667
Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638
|||||||||||||| ||| ||| | || || |||| ||| || || |||
Sbjct 1186668 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 1186726
Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698
| || | || | || |||||| ||||| | || ||||| || |||||||| ||||||
Sbjct 1186727 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 1186786
Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758
|| | ||| || || || || ||||| ||||| || ||| | || ||| | || ||
Sbjct 1186787 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 1186846
Query 19759 GAAATTAACTTACCCGATGAA 19779
|||||| | ||||| || |||
Sbjct 1186847 GAAATTCAATTACCAGACGAA 1186867
Score = 113 bits (124), Expect = 4e-20
Identities = 559/866 (65%), Gaps = 38/866 (4%)
Strand=Plus/Plus
Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767
||||| | |||| || || || || ||| | || || | ||| |||| || |||||
Sbjct 439280 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 439339
Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825
||| || |||||| | |||||| | || || ||| || | |||| || | || |
Sbjct 439340 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 439395
Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880
| |||| | | ||||| |||| | | | ||||| |||||||| ||| || |
Sbjct 439396 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 439455
Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940
| || || ||||| ||||| || | || || ||| | |||||||| |
Sbjct 439456 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 439515
Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000
|||| || || || |||||| || ||||| || || || |||| || | |||
Sbjct 439516 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 439575
Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
| || || |||||||| ||| || || ||| || ||||| ||||| || |||
Sbjct 439576 TTGACACTTACATCAAGGATCCTAAGGAACACGAAT--TC--TTGTTGAATGCCATTGAA 439631
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116
|| | || || ||| | || || | |||||| ||| |||||| | | ||
Sbjct 439632 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 439691
Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | ||| || | || ||||| || | |||||||| | || || || ||
Sbjct 439692 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 439751
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| ||||| || ||||| ||||| ||||||||||| || ||||| || |||
Sbjct 439752 TCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 439811
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
|| || || || | | |||||||| || || ||| ||||| || ||| || || |
Sbjct 439812 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 439870
Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349
| | | ||| | ||||| | || |||| | | ||| || | ||| ||
Sbjct 439871 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 439924
Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407
|| |||| ||| |||| || | | | || || |||| || | || | || |||
Sbjct 439925 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 439982
Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467
|| | ||||||||||||||| | |||| ||||||| | |||| | | |
Sbjct 439983 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 440042
Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527
||| | | ||| |||| | || ||||| || || ||||||||||| ||||| |||
Sbjct 440043 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 440102
Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553
| || ||||| || || || |||||
Sbjct 440103 GCCGGTAAAACCAATTTCTTCGAAAA 440128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455961248040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |