Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 152 4e-32 >seq3 Length=1603786 Score = 152 bits (168), Expect = 4e-32 Identities = 303/441 (69%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 || || ||| | | ||| || || ||| ||| ||||||||||| || ||| || | || Sbjct 1186430 GGTCTCTTGTTGTTTGGTCCTCCAGGTACTGGTAAAACATTAATCGCAAGAAAAATCGGT 1186489 Query 19408 AAATTACTTACAAAACAACCTCCCAAA-ATTGTAAATGGTCCTGAAATCTTAAATAAATA 19466 | | | | | | ||| ||||| ||||| || ||||| |||||| | | |||||| Sbjct 1186490 ACAATGTTGA-ATGCCAAAGAGCCAAAGATTGTTAACGGTCCAGAAATCCTCAGTAAATA 1186548 Query 19467 TGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA 19526 ||| || || ||||||||| | || ||||| || ||||| | |||| | || Sbjct 1186549 TGTCGGCTCTTCAGAAGAAAATATCCGTAACTTGTTCAAGGATGCTGAGGCAGAATATAA 1186608 Query 19527 ACGTTTAGGGCGCAAAAG-TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCT 19585 | | |||| | | || ||| ||||||||||| || | ||||||||||| | | | Sbjct 1186609 A-GCCAAGGGTGAAGAATCTTCATTGCACATTATCATTTTCGATGAATTGGATTCTGTAT 1186667 Query 19586 GTAAGCAAAGAGGTTC---TGGT----GTAAATGGAGTACATGACACTGTTGTCAATCAA 19638 |||||||||||||| ||| ||| | || || |||| ||| || || ||| Sbjct 1186668 TCAAGCAAAGAGGTTCAAGAGGTGACGGTACA-GGCGTTGGAGACAATGTGGTTAACCAA 1186726 Query 19639 CTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACT 19698 | || | || | || |||||| ||||| | || ||||| || |||||||| |||||| Sbjct 1186727 TTGCTTGCTAAGATGGATGGTGTTGACCAATTAAACAATATATTGGTTATTGGTATGACT 1186786 Query 19699 AATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATC 19758 || | ||| || || || || ||||| ||||| || ||| | || ||| | || || Sbjct 1186787 AACCGTAAGGATTTGATTGATAGTGCCTTGTTACGTCCTGGTAGATTTGAAGTCCAGGTC 1186846 Query 19759 GAAATTAACTTACCCGATGAA 19779 |||||| | ||||| || ||| Sbjct 1186847 GAAATTCAATTACCAGACGAA 1186867 Score = 113 bits (124), Expect = 4e-20 Identities = 559/866 (65%), Gaps = 38/866 (4%) Strand=Plus/Plus Query 43709 TTTCCAATTCAA-TATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTG 43767 ||||| | |||| || || || || ||| | || || | ||| |||| || ||||| Sbjct 439280 TTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCCGAGGCCTCTTTTTG 439339 Query 43768 GACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCAC-ATTGGATTGCATTAAAACCA 43825 ||| || |||||| | |||||| | || || ||| || | |||| || | || | Sbjct 439340 GACTGCTGAAGAAATCGATTTGTCCAAGGATCTT--CATGACTGGAA--CAACAGAATGA 439395 Query 43826 -CAAGAA--AAACATTTTATATCTTTGGTTT--TGGCGTTTTTTGCTGCGAGCGACGGGA 43880 | |||| | | ||||| |||| | | | ||||| |||||||| ||| || | Sbjct 439396 ACGAGAACGAGAGATTTTTCATCTCCAGAGTGCTTGCGTTCTTTGCTGCTTCCGATGGTA 439455 Query 43881 TAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGAT 43940 | || || ||||| ||||| || | || || ||| | |||||||| | Sbjct 439456 TCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTCCAGAAGCCAAGT 439515 Query 43941 GTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGA 44000 |||| || || || |||||| || ||||| || || || |||| || | ||| Sbjct 439516 GTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTTATTCGTTGTTGA 439575 Query 44001 TAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056 | || || |||||||| ||| || || ||| || ||||| ||||| || ||| Sbjct 439576 TTGACACTTACATCAAGGATCCTAAGGAACACGAAT--TC--TTGTTGAATGCCATTGAA 439631 Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT 44116 || | || || ||| | || || | |||||| ||| |||||| | | || Sbjct 439632 ACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCGTGATGACGAA 439691 Query 44117 TCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | | | ||| || | || ||||| || | |||||||| | || || || || Sbjct 439692 GCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGTTTTTCTCTGGT 439751 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || ||||| ||||| || ||||| ||||| ||||||||||| || ||||| || ||| Sbjct 439752 TCCTTTGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTTTGACCTTCTCA 439811 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 || || || || | | |||||||| || || ||| ||||| || ||| || || | Sbjct 439812 AACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTTTGCTA-TTCCA 439870 Query 44294 TATCTAGGAGACGATAAGCC---TTCATGTAAGACAAT-TACAGATATTGTTGTAGAGGC 44349 | | | ||| | ||||| | || |||| | | ||| || | ||| || Sbjct 439871 TCATTTGAAGA--ACAAGCCAGATCCA---AAGATTGTCGAAAGA-ATCATCACAGAAGC 439924 Query 44350 AGTAAAGATAGAACAAGA-ATTTATGA-CAACAGCATTACCTGTAAATTTAATAGGAATG 44407 || |||| ||| |||| || | | | || || |||| || | || | || ||| Sbjct 439925 TGTTGAGATCGAA-AAGAGATACTTCATCGAC-GCTCTACCCGTTTCTCTATTGGGTATG 439982 Query 44408 AATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467 || | ||||||||||||||| | |||| ||||||| | |||| | | | Sbjct 439983 AACGCTGATTTGATGAACCAATACGTCGAATTTGTTGCAGACAGACTACTGGTTGCTTTA 440042 Query 44468 GGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTG 44527 ||| | | ||| |||| | || ||||| || || ||||||||||| ||||| ||| Sbjct 440043 GGTAACAAGAAATACTACAACGTCACTAACCCATTCGACTTTATGGAAAACATTTCCTTG 440102 Query 44528 GAAGGCAAAACAAACTTTTTTGAAAA 44553 | || ||||| || || || ||||| Sbjct 440103 GCCGGTAAAACCAATTTCTTCGAAAA 440128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455961248040