Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 316 3e-81 seq3 111 2e-19 >seq8 Length=958696 Score = 316 bits (350), Expect = 3e-81 Identities = 922/1399 (66%), Gaps = 43/1399 (3%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||||| || || || || || | |||||||||||| | || || Sbjct 334323 GTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGA 334382 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || ||||||||||| || | ||| | | ||| | ||||| | | |||||| | Sbjct 334383 AGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGC 334442 Query 110827 CTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTT-TCACCTTCCCACATGTCAAACTG 110883 ||| | |||||| || ||| | || | || | | ||| ||| | || || || Sbjct 334443 CTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACC---CCATAGATCGAATTG 334499 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | |||| || || ||||| || || | |||||| | ||||| | | || Sbjct 334500 TAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGC 334559 Query 110944 CAATTCACAGCTCGCCTC-CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 |||||| | || || || | | | || || || ||||||||||| | | |||| Sbjct 334560 CAATTCCATGGAGGCTTCACAAGCAC-CATGGTAGATAGTTTCAAAGATTTGGACGTTCA 334618 Query 111003 -TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 111061 |||| ||| |||| || || ||||||| | || || || || | || || | | Sbjct 334619 ATCTCTTTG-CTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 334677 Query 111062 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACG 111121 |||||||||||||| |||||||||| |||| ||| || || ||| ||||| ||||| Sbjct 334678 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 334737 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 |||||| | || | |||||||| || ||| | || || | || ||| | ||| || Sbjct 334738 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 334797 Query 111182 TG-AAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT----TGACAT--------ACTT 111228 || || || || | | | | || |||||| ||| ||| || || Sbjct 334798 TGCAACTTCTTGA-AGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGC 334856 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| | ||||| || ||||| || |||||||| || || || | | ||| || | Sbjct 334857 TGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAAC 334916 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 ||||| ||| ||||| ||| ||| || || ||||| |||||||| ||||||||||| Sbjct 334917 GATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTT 334976 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || ||||||||||| |||||| | || || || || || || || | || | || Sbjct 334977 GTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGAT 335036 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACT 111467 ||| | ||| ||| | | | || | ||| | | | || || || |||||| Sbjct 335037 AGCGTACCACAACTTTTGAGCCTTG-ACAGTCTTTCTACCACGGCCTTCTCTCTCGTAAC 335095 Query 111468 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 111527 | ||| | |||||||| || ||||| | || | | |||||||| | || || Sbjct 335096 GTTCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTG 335155 Query 111528 GACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || |||| | || ||| | | | ||| ||| || | |||||||||||| ||||| || Sbjct 335156 GAGAGAACAAAGTCCAAT--CTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 335213 Query 111586 CCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644 ||| || | || || | |||| | ||| || ||||| | ||| ||||| || | Sbjct 335214 CCATAGTGCTGGGAACAAGTCTCTTGCACGGA-TTTCTTCCTTACCGTGGTTCTTTCTGA 335272 Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAG 111698 || | ||| || | |||||| | |||||||||||| | || | |||| || Sbjct 335273 TGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAG 335332 Query 111699 ATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 || ||| | ||| |||| | || || || || ||| ||| || || |||| || Sbjct 335333 GTCTCTTGTTA---CCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCA 335389 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 111818 ||||||||||||| | || ||| || || || ||| ||| | | | | Sbjct 335390 TTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAA 335449 Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878 | || ||||||| |||||||| ||||| ||| ||||| ||||| ||| | | Sbjct 335450 TGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCA 335509 Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938 ||| | || ||||| | || || || ||||| |||| | ||||| || |||| Sbjct 335510 AAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACA 335569 Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 111998 | || || || |||||||||||||| || || || | ||||| |||| || ||| Sbjct 335570 TTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTT 335628 Query 111999 -GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || ||| || ||||| || ||||| ||| |||||||| |||| Sbjct 335629 AGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACA 335688 Query 112058 GCGACCCGCATGAACATGT 112076 || || | ||||| ||||| Sbjct 335689 GCCACTCTCATGATCATGT 335707 >seq3 Length=1603786 Score = 111 bits (122), Expect = 2e-19 Identities = 352/530 (66%), Gaps = 23/530 (4%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||||| | |||| | ||| ||||||||| | ||| Sbjct 439856 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 439797 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 122776 |||||| | |||| |||||||||||| | || || ||| || || || ||||| || | Sbjct 439796 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCA-AAGGAACCAGAGAAAAACA 439738 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATC- 122834 ||| ||||| || ||||||| | | ||| ||| | || | ||| | |||| Sbjct 439737 CACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTA-TAG---GGCTTCGTCATCA 439682 Query 122835 --AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC- 122891 || |||| | || ||||||| ||||| | | || ||| | |||| ||||| Sbjct 439681 CGAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCA 439622 Query 122892 TTCA--AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAA 122949 |||| || || | | | | || |||||| ||||| |||||||||| ||| Sbjct 439621 TTCAACAAGAATTCGTGTTCCTTAG---GATCCTTGATGTAAGTGTCAATCAACAACGAA 439565 Query 122950 TATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTC 123008 || |||||| || | ||| ||| || ||| | ||||||| | ||||| Sbjct 439564 TAAGTTTCGGAGTGGATGTTTTCCATCAT-AATTTGGAAACCGTAGAAACACTTGGCTTC 439506 Query 123009 GCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 123068 || || |||||| | | || || | | || || || || |||||||| Sbjct 439505 TGGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGA 439446 Query 123069 CCCAGCAAAGAATGCCAGGA---TGTACTTTATGAATTTCT-TTTCATTTTCATTCAGGG 123124 |||||||||| || || | || | | | ||| ||| ||| ||||||| | Sbjct 439445 AGCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTC-TGT 439387 Query 123125 TCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174 | |||||||| | |||||| ||||||||||| | |||||| ||||||||| Sbjct 439386 TGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 439337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800