Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 212 8e-50 seq3 102 1e-16 >seq8 Length=958696 Score = 212 bits (234), Expect = 8e-50 Identities = 892/1398 (64%), Gaps = 29/1398 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || |||| ||||||||||| || ||||| |||| |||||||||||||| ||| || Sbjct 334324 TACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTAACCCAAGATTTGGGATGTAGAA 334383 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | | | ||| | ||||| | || | | || || Sbjct 334384 GCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTTAGACCGTGTTGCTTGATTTCAGCC 334443 Query 118302 TTGAGAGCGTCCCAGTCG--TAGTTGAGCTTTG-TCTCCCCCTGCCACATATCAAACTGG 118358 || | ||||| || ||| | || | | ||| ||| || | ||| || || Sbjct 334444 TTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTCTTACCC---CATAGATCGAATTGT 334500 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 | |||||| || ||||| || || || | |||||||| || || ||| ||| Sbjct 334501 AACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCATATGGACCTTCTTCCTTTGCC 334560 Query 118419 AATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 ||||| |||| || || || | || || || |||||||| || | | ||| Sbjct 334561 AATTCCATGGAG---GCTTCACAAGCACCATGGTAGATAGTTTCAAAGATTTGGACGTTC 334617 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | ||| || || || || ||||| | | || || || || | || || | | Sbjct 334618 AATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCATCATGAAAGCGTCGGCTAAA 334677 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG 118595 ||||| ||||| | |||| || | ||||||||| || || | | ||| || || || Sbjct 334678 CCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGATCTTCTAGCAGTTTCAACT 334737 Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655 |||||| | || | || || | || || | || || | |||||| | ||| || Sbjct 334738 GGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGTCAAAACCTTAGAGATATCG 334797 Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATACTT--AGGAAGG-- 118709 || | ||| | | | | | | |||||| ||| | ||| || | ||| | Sbjct 334798 TGCAACTTCTTGAAGTTGTAGGTTTGAGTCTTACCATCGTTTGATATTTCAATGAACGCT 334857 Query 118710 ------GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || |||| ||||| |||| ||| || || | || ||| || | Sbjct 334858 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 334917 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| |||||||| ||| ||| || || ||||||||||||||||| ||| || Sbjct 334918 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 334977 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||| ||||||||||| |||||| |||| || || || || ||||| | | | ||| Sbjct 334978 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 335037 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||| | | ||| ||||| | | || || ||| |||||| | Sbjct 335038 GCGTACCACAACTTTTGAGCCTTGACAGTCTTTCTACCACGGCCTTCTCTCTCGTAACGT 335097 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 ||| | |||||||| || ||||| | |||| | |||||||| | | ||| Sbjct 335098 TCGTACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGA 335157 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||| | || ||| | | || ||| || | ||||||||| || ||||||||||| Sbjct 335158 GAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCAT 335217 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || | ||| | || | || |||||| | || || || | | || Sbjct 335218 AGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCG 335277 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACG 119182 | ||||| | |||||| | |||||| || || | ||||| |||| | ||| | Sbjct 335278 ACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTC 335337 Query 119183 ACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATG 119240 | |||| | |||| || || | |||||| ||| || ||||||| ||||||||| Sbjct 335338 TTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATA 335397 Query 119241 ATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGG 119300 ||||| | || || || || || ||| ||| | | | | | ||| Sbjct 335398 ATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGA 335457 Query 119301 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 119360 ||||||| ||||||||| || || ||| ||||| || || ||| | | | || || Sbjct 335458 ATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCG 335517 Query 119361 TAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGC 119420 || || || || || || || |||| | || | ||||| || |||||||| || Sbjct 335518 TAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGA 335577 Query 119421 CTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT-GGGACAT 119479 || |||||||| ||||| || || || | ||||| |||| || ||| | ||||| Sbjct 335578 TGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAA-GTATCTTAGAGACAT 335636 Query 119480 CTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 119539 || ||| || ||||| || ||| ||| ||||| ||||||| | || | Sbjct 335637 TAGGTTGTAAGTTTCCAAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCT 335696 Query 119540 CATAAACATGTATTGGGG 119557 ||| | ||||| ||| || Sbjct 335697 CATGATCATGTGTTGAGG 335714 >seq3 Length=1603786 Score = 102 bits (112), Expect = 1e-16 Identities = 349/531 (66%), Gaps = 25/531 (5%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || || | | | || | ||| || |||||| || ||| Sbjct 439856 GGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACC 439797 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | |||| ||||||||||||||| || ||| ||| || |||||||| || | Sbjct 439796 TGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACAC 439737 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATC-- 130191 || ||||| |||||||||| | | ||||| | | ||| ||| || ||| Sbjct 439736 ACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGC---GTATAGGG-CTTCGTCATCAC 439681 Query 130192 -AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-T 130249 || ||| | || ||||| || ||||||| | ||| || | ||| | || || | Sbjct 439680 GAATCCATCTAATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCAT 439621 Query 130250 TCA--AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAAT 130307 ||| |||| ||| | || || | ||||| |||||||| | || || | |||| Sbjct 439620 TCAACAAGAATTCGT--GTTCCTTA-GGATCCTTGATGTAAGTGTCAATCAACAACGAAT 439564 Query 130308 ATGTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCG 130366 | |||||| |||| ||| ||| || || || |||||||| | ||||| Sbjct 439563 AAGTTTCGGAGTGGATGTTTTCCATCATAATTTGGAAAC-CGTAGAAACACTTGGCTTCT 439505 Query 130367 CTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGAC 130426 || || |||||| | | || || | | || || || || |||||||| Sbjct 439504 GGAATTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAA 439445 Query 130427 CCAGCAAAAAACGCCAGGA---TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 130480 ||||||| ||||| || | | | | | ||| || || |||||||||| | Sbjct 439444 GCAGCAAAGAACGCAAGCACTCTGGAGATGAAAAATCTC---TCGTTCTCGTTCATTCTG 439388 Query 130481 GTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 | |||||||| | ||||||||| || | ||| | || || ||||||||| Sbjct 439387 TTGTTCCAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAA 439337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435138156480