Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 167 3e-36
>seq8
Length=958696
Score = 167 bits (184), Expect = 3e-36
Identities = 505/770 (66%), Gaps = 14/770 (2%)
Strand=Plus/Plus
Query 79049 GGCACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATG 79104
|||| |||||| |||| ||| || || || || || || ||| |||| || | |
Sbjct 334858 GGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCTTCTGGGTTAGAGTATTCAACG 334917
Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCG 79164
||||| ||||| || || |||||||| || || | |||||| || || ||||||| |
Sbjct 334918 ATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTG 334977
Query 79165 TTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGA-CTCTTGAGAAC 79223
||||| || |||||||| |||| | || || || || || ||| || |||
Sbjct 334978 TTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATA 335037
Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTA- 79280
|| || ||| | | | ||| |||| ||| | |||| | || | | ||||
Sbjct 335038 GC-GTACCACAACTTTTGAGCCTTGACAGTCTT--TCTACCACGGCCTTCTCTCTCGTAA 335094
Query 79281 CGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTG 79340
||| || ||||| | | || | || || || ||||| || | ||| || ||||
Sbjct 335095 CGTTCG-TACAATGCTTCAAATTCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTT 335153
Query 79341 CGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGAT 79400
|| | | || ||| || |||| |||||| || ||| |||||| || || |||||
Sbjct 335154 TGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGAT 335213
Query 79401 CCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAG 79460
||| || || | ||| | ||| | ||| || || || | || |||||| | |
Sbjct 335214 CCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGAT 335273
Query 79461 CTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTT 79520
|||| ||||| | ||| || | |||||| ||||| | || | |||||| | |||
Sbjct 335274 GTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGG 335333
Query 79521 GCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGG 79580
| |||| || || |||| ||||| || || |||||||||||||| || | ||| ||
Sbjct 335334 TCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGG 335393
Query 79581 CACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTT 79640
| || |||| | ||||| || || || | |||| | | ||||||||
Sbjct 335394 AATAATACCGTTAGAAGTACCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTT 335453
Query 79641 CGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCG 79699
| | | ||| | || || || || | ||| ||||| || || ||||| | |
Sbjct 335454 -GTGAATGTGCAAACCAATACCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAG 335512
Query 79700 TCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCT 79759
| ||||| || || || || || || |||||||| || || ||||| || ||||| |
Sbjct 335513 TGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTT 335572
Query 79760 GTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809
|||| | ||||| || ||||| || || |||| ||||| ||||||
Sbjct 335573 GTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGAAGCGTGTGTGAAG 335622
Score = 152 bits (168), Expect = 6e-32
Identities = 492/756 (65%), Gaps = 6/756 (1%)
Strand=Plus/Minus
Query 19195 CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAG 19254
|||||| ||||| |||| || |||||||| || ||||| | || || |||||
Sbjct 335622 CTTCACACACGCTTCGCCTACACTTTTCAATGCTGGTACTCCTCATCCACAAATGTCATC 335563
Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314
|||||||||||||| |||||||| || |||||| || || ||||| || | |||||
Sbjct 335562 ATGTTTCCTAGTGGCCATGAAGGAAGATTCCATTGAAGGTATTTACGACACTTTGAAGGA 335503
Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373
|| || ||||| ||| | || ||||| || | ||| | | | || || || |
Sbjct 335502 ATGTGCCATGATCTCTAAGACCGCTGGTGGTATTGGTTTGCACATTCAC-AACATTCGTT 335444
Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433
| | ||| | || ||| || ||||| | ||||||| | |||||| | |
Sbjct 335443 CTACCGGTTCTTACATTGCTGGTACTAACGGTACTTCTAACGGTATTATTCCAATGATTC 335384
Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493
| || ||||||||||| || | ||||| |||| || || ||| | || | |
Sbjct 335383 GTGTTTTCAACAACACTGCTCGTTACGTTGACCAAGGTGGTAACAAGAGACCTGGTGCCT 335324
Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553
||||| | ||| |||||||||||||| | || || | || ||| |||| | | ||
Sbjct 335323 TCGCCTTGTACATCGAGCCATGGCACTCAGATATCTTCGACTTCGTCGACATCAGAAAGA 335264
Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613
|||| ||| | || || || || | ||| | ||| | || | ||||| || || |
Sbjct 335263 ACCACGGTAAGGAAGAAATCCGTGCAAGAGACTTGTTCCCAGCACTATGGATCCCAGATC 335204
Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673
| |||||| ||| || |||||| ||||||| ||| || | | || ||||| |
Sbjct 335203 TTTTCATGAAGAGAGTCGAGAAGAACGAAGATTGGACTTTGTTCTCTCCAAACGAAGCAC 335144
Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGAC-TTACGTAGCC 19732
| ||| |||| || || ||||| || | || | | ||||| || || |||||
Sbjct 335143 CAGGCTTACCAGATGTTTACGGTGATGAATTTGAAGCATTGTA-CGAACGTTACGAGAGA 335085
Query 19733 CAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGC 19792
| ||||| | ||| ||| ||| | | | ||| | ||| || ||||
Sbjct 335084 GAAGGCCGTGGTAGAAAGACTGTCAAGGCTCAAAAGTTGTGGTA-CGCTATCTTGGAAGC 335026
Query 19793 -CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAA 19851
|| ||| || || || || | |||| |||||||| || ||| ||| ||
Sbjct 335025 TCAAACCGAAACTGGTACCCCATTCATGCTATACAAGGATGCTTGTAACAAGAAGAGTAA 334966
Query 19852 TCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTC 19911
||| |||||| | || | |||||||| || ||| ||||| ||||||| | || ||
Sbjct 334965 TCAAAAGAACTTGGGTACTATCAAGTCTTCGAACTTGTGTTGTGAAATCGTTGAATACTC 334906
Query 19912 CAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTC 19947
|| || || || || || || ||||| |||| ||
Sbjct 334905 TAACCCAGAAGAAACCGCTGTTTGTAACTTGGCTTC 334870
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|||||||| || ||||| | |||||||||||||||||| | ||||| | || |||
Sbjct 333985 TAGTACATACCAGTCTTCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTA 334044
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318
||| | | ||| ||| ||||| | ||| ||||| || ||||| || ||| |
Sbjct 334045 CCCATAGTTGGGGCACGAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCA 334104
Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378
||||| || ||||| ||||| | |||||||| || ||||| | ||| ||| | |
Sbjct 334105 CGGTCAGCGGCCATATCGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAG 334164
Query 78379 GCCTTCAGCTCTTCCTGGATGT 78400
| || ||||||| ||||||
Sbjct 334165 TCTTTTAGCTCTTGTGGGATGT 334186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524745147520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |