Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2 176 1e-38
seq3 170 5e-37
seq5 165 2e-35
seq8 91.5 4e-13
>seq2
Length=1698977
Score = 176 bits (194), Expect = 1e-38
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558
|||| ||| | |||||| |||||||| ||||||| ||||| |||| | |||||| ||
Sbjct 909498 CTCAAGACCAAGTGGAGTGTGGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCG 909439
Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618
||||||| ||||| ||||| || || | || ||||||||| || |||||||||||||||
Sbjct 909438 TCTTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTG 909379
Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678
||||| ||||| ||||||| || || ||||| || | ||| || || || |||||
Sbjct 909378 TCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATA 909319
Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || |||||||| || | ||| | ||||||
Sbjct 909318 GTCTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 909284
Score = 159 bits (176), Expect = 8e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || || ||||| ||||| | ||||| |||| | |||||| ||
Sbjct 909271 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCC 909212
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| || || ||||| || || | || ||||||||| || ||||||||||||||
Sbjct 909211 GTCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 909152
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| ||||| ||||||| || || ||||| || | ||| || || || |||||
Sbjct 909151 GTCTTGAATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 909092
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| ||||| |||||||| || | ||| | ||||||
Sbjct 909091 GGTTTTGCCTGTCAAAGTCTTGACGAAGATTTGCAT 909056
Score = 156 bits (172), Expect = 1e-32
Identities = 166/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || || ||||| ||||||| ||||| |||| | |||||| ||
Sbjct 909043 TCTCAAGACTAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCC 908984
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| ||||| || || || || | || ||||||||| || ||||||||||||||
Sbjct 908983 GTCTTCTAATTGCTTACCCGCAAAAATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 908924
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||||| ||||||| || || ||||| || | ||| || || || |||||
Sbjct 908923 ATCTTGGATCTTAGACTTCACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 908864
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || || || | || | |||||||||
Sbjct 908863 GGTCTTACCTGTTAACGTCTTGACAAAGATTTGCATTTT 908825
>seq3
Length=1603786
Score = 170 bits (188), Expect = 5e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
||||||| ||| | ||| || |||||||| ||||||| ||||| || | |||||||||
Sbjct 1548440 AGTCTCAAGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTA 1548499
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| ||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||
Sbjct 1548500 CCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCC 1548559
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
|||||||| ||||| ||| ||| || |||||||| || | ||| || || || |||
Sbjct 1548560 TTGTCTTGAATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCGACTTCCAAAGTG 1548619
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| ||||| || ||||| || || | |||
Sbjct 1548620 ATGGTCTTACCAGTCAAGGTCTTGACGAA 1548648
>seq5
Length=1351113
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || || ||||| ||||||| ||||| || | ||||||||| ||
Sbjct 1192839 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 1192780
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 1192779 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTT 1192720
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || || || || ||
Sbjct 1192719 GTCTTGGATCTTAGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 1192660
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || | || || | ||| | ||||||
Sbjct 1192659 AGTCTTACCAGTTAGGGTCTTGACGAAAATTTGCAT 1192624
>seq8
Length=958696
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||| || || || |||||||| |||||||||||
Sbjct 270389 GAAAATTTGACCATCGGTAATGGAAATAACGTTGGTTGGAATATAAGCGGAAACATCACC 270330
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||||| || || || || || | || ||||||||
Sbjct 270329 ACCTTGGGTTTCGATGACTGGCAAAGCGGTCAAAGAACCACCACC 270285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531077765552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |