Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8 309 4e-79 seq3 208 1e-48 seq5 150 2e-31 >seq8 Length=958696 Score = 309 bits (342), Expect = 4e-79 Identities = 1366/2143 (64%), Gaps = 46/2143 (2%) Strand=Plus/Plus Query 76778 CAAT-GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 |||| || ||||| || | | |||||| | || || | ||| |||||||||||||| | Sbjct 333941 CAATAGTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGGTAGTACATACCAGTCT 334000 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | |||| |||||||||||||||||||| |||| || | | || | Sbjct 334001 TCAAACCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTGGGGCAC 334060 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| ||| || ||||||||| |||| | | ||||| ||||| | Sbjct 334061 GAATGTGAATGTTCAACGATTGGGATTGATCGATATAAGCAGCACGGTCAGCGGCCATAT 334120 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 |||||| |||||| | |||||||||| ||| ||| | | | ||| | || | || Sbjct 334121 CGATAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAGTCTTTTAGCTCTTGTG 334180 Query 77017 GAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCAT 77073 | | ||||| ||||| || |||||| ||| | || || ||| ||| | | Sbjct 334181 GGATGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTCATAGCTT 334240 Query 77074 CATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAAT 77132 ||| ||| ||| || || ||| | | || | | ||| || || ||||| ||| Sbjct 334241 CATCCCA-AATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATTTGGAAT 334299 Query 77133 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTG 77192 || ||||| || || | ||||| ||| || || || ||||| || | | | || ||| Sbjct 334300 TCACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTG 334359 Query 77193 TTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTG 77252 | ||||| ||||| | |||||||| |||||||| || || | ||| ||| ||||| Sbjct 334360 TAACCCAAGATTTGGGATGTAGAAGCGGTTGGCATTGGAGCGAGCAACAAAGAGTTTCTT 334419 Query 77253 AGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACA 77312 ||||| ||| |||||| | | || | | | ||| ||||| || | | || Sbjct 334420 AGACCGTGTTGCTTGATTTCAGCCTTCAAGTTATCCCATTCCCATAGGTTAGTTGGGGTC 334479 Query 77313 ACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCA 77372 | |||| |||||| |||||| | || | | || || || | | |||| Sbjct 334480 TTACCCCATAGATCGAATTGTAACTTACCTTCAGATGCTGGAGAGCCTGGGAAAGATTCA 334539 Query 77373 TAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTT 77432 || || |||||| | || | ||| ||||| | || || | || || ||| Sbjct 334540 TATGGACCTTCTTCCTTTGCCAATTCCATGGAGGCTTCACAAGCACCATGGTAGATAGTT 334599 Query 77433 TCGAAAATCTTCTTATTGAGATCT-TGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 || || || | || | |||| | |||||| | ||||| || || ||| | Sbjct 334600 TCAAAGATTTGGACGTTCA-ATCTCTTTGCTTCTTCAGAGTCAAATGGCAAACGTAGCAT 334658 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 || || || || ||||| || ||||| || | ||||||||||||||||| | || || Sbjct 334659 CATGAAAGCGTCGGCTAAACCTTGAACACCCAATGCAATAGGTCTATGTCTCATGTTTGA 334718 Query 77552 AATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAAC 77611 || |||| | || |||||||| ||| ||| || ||| | || | || | | Sbjct 334719 TCTTCTAGCAGTTTCAACTGGATAATAGTTACGGTCAATGATTCTGTTCAAGTTGCGAGT 334778 Query 77612 AACTACTTTAA----------CCACGTCCTTTAGTTTAAGAAAATCAAATCTT-CCATC- 77659 | || ||| | || || | |||| || | | |||| ||||| Sbjct 334779 CAAAACCTTAGAGATATCGTGCAACTTCTTGAAGTTGTAGGT--TTGAGTCTTACCATCG 334836 Query 77660 -----TATAACAAACAT-GTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 ||| ||| | | | |||||| ||||| || | |||||||| || || Sbjct 334837 TTTGATATTTCAATGAACGCTGGCAAAGCGATAGAAGCCAAGTTACAAACAGCGGTTTCT 334896 Query 77712 TTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGA 77771 | | ||| | |||| | || || ||| | || | | |||||||| |||| Sbjct 334897 TCTGGGTTAGAGTATTCAACGATTTCACAACACAAGTTCGAAGACTTGATAGTACCCAAG 334956 Query 77772 TTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTT 77831 || | ||| || ||||| || || || | ||||| || || || || || || || ||| Sbjct 334957 TTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAATGGGGTACCAGTT 335016 Query 77832 TCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGT 77889 || | || | ||| | |||| | ||| | ||| | ||| || | | ||| | Sbjct 335017 TCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGCCTTGACAGTC--TTTCT 335072 Query 77890 ATC---GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | | |||| ||||| || || | ||| | || |||||||||||| || |||| Sbjct 335073 ACCACGGCCT-TCTCTCTCGTAACGTTCGTACAATGC--TTCAAATTCATCACCGTAAAC 335129 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 ||| || || || ||| ||||| | | ||| | ||| || | | | || || Sbjct 335130 ATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTCTTCTCGAC 335189 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || ||||| || ||||| || |||||||| || || | |||| | | ||| Sbjct 335190 TCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACGGATTTC 335249 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 ||| || || |||||| | | |||| || || | ||||| || |||||||| || Sbjct 335250 TTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCATGGCTC 335309 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 | || | || | | ||||||| || ||||| || || || | || | || || Sbjct 335310 GATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGT 335369 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || |||| | | ||||||||||||||||||||| || || || || |||| ||| Sbjct 335370 GTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACCAGCAAT 335429 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 ||| || | | ||||| || |||| | || || || || || ||||||| Sbjct 335430 GTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGTCTTAGA 335489 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTT 78364 || | || || ||||| || ||||| ||||| || || || ||| ||||| Sbjct 335490 GATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTTCATGGC 335549 Query 78365 AAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGA 78424 | || ||||| |||||||| ||||| ||| || ||||| || | ||| || || Sbjct 335550 CACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGTAGGCGA 335609 Query 78425 TGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC 78484 || || || || || || ||| | ||| ||||| ||||| | | | ||| || || Sbjct 335610 AGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTCAATATC 335669 Query 78485 CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTT 78544 | || || || || || || | ||| | ||| || ||||| | |||| | ||| Sbjct 335670 TCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGCAACCTT 335729 Query 78545 ATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 78604 | || ||| | | |||||| || |||||| || || ||||| || |||||| || Sbjct 335730 ACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTAGTTGAATTG 335789 Query 78605 AAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC 78664 || ||||| ||||| | ||| |||| || | ||||||||| | | || || || Sbjct 335790 GAAATCTCTGTCGTAGACAATCGCAGAGTTCAAAGTATCTTTGTTCTCCATGACGATGTC 335849 Query 78665 CATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAA 78724 || | ||||| ||||| || | | |||| | || || || || | | | Sbjct 335850 ATACACCTCATCCGAAATCATAGGCGAGTGAATACCAGTCTTTGGGTTGACCCATCTGTA 335909 Query 78725 TAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGC 78784 || ||||| | || | ||| | || | |||| |||||| | ||||| | || Sbjct 335910 CAAGTCTTCGACCACTTGCGAAAACTGCTTCGTGGTTTGCTTGTGCAAGTTAGAAATGGC 335969 Query 78785 TATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 78843 ||||| || || | | |||| ||||| || || || || || || ||| | ||| Sbjct 335970 AATTCTAGCGGCCAAAGTAGCGTAATCTGGGTGAATGGTGGT-CATGTAGGCACATGTTT 336028 Query 78844 CTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || ||||||| || | ||| || || || | ||| Sbjct 336029 CAGCAGCCAAGTTATCTAATTCAACAGTCGTTACACCTTCATA 336071 >seq3 Length=1603786 Score = 208 bits (230), Expect = 1e-48 Identities = 586/890 (66%), Gaps = 30/890 (3%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| || || ||| | || ||||| ||||| ||||| || |||| || || ||| Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 |||||||| || ||||| ||| | || || ||| || ||||| | | Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 ||||| |||||||| ||||| | ||| ||||||| ||| ||||| || | || Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970 Query 48030 TTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 ||| |||||||| || | ||| | ||||| |||||| ||||| || | | Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTC------TGT 439917 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATA---------CAACAAATGTTTAAACATTAA 48139 |||| | | |||| || | ||||| | |||||| | || | || Sbjct 439916 -GATGATTC--TTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAA 439860 Query 48140 ACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 48199 ||| ||||| || || | |||||||||||| | ||| |||||||| || || || | Sbjct 439859 ACAGGCAAAGTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAA 439800 Query 48200 ACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAA 48259 ||| ||||| | || || || | ||| || || || || || || ||||| || || Sbjct 439799 ACCTGGCATCAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAA 439740 Query 48260 TATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---G 48316 | ||||| ||||| || || || | ||| || |||| |||||||| | | Sbjct 439739 CACACCTTCCACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACG 439680 Query 48317 TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCAT 48375 ||||| | ||||| | |||||| |||||| | || || ||||| || |||| Sbjct 439679 AATCCATCTAATGGCCCATTGAGCCTT-TTCTTTGATTTGTGGAATGGTTTCAATGGCAT 439621 Query 48376 TAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACA 48435 | || | || | | ||| || ||| || | |||||| || || || | ||| Sbjct 439620 TCAACAAGAATTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAG 439561 Query 48436 TTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGA 48495 |||||||||| || ||||| || || || || ||||| ||||| | ||||||| | Sbjct 439560 TTTCGGAGTGGATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAA 439501 Query 48496 TCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAG 48555 | || ||||| | | | || ||| |||| || || || || || ||||| ||||| Sbjct 439500 TTTGCACCTCAGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAG 439441 Query 48556 CAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGT---TTATTC 48611 |||| || || | || | | | || ||| || | ||||| ||| | || ||| Sbjct 439440 CAAAGAACGCAAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTGTTGTTC 439382 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||||| | ||| || || | ||| | ||||||||| |||||||| || ||||| ||| Sbjct 439381 CAGTCATGAAGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCT 439322 Query 48672 TTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | ||||| | ||| || || ||| | ||||||||||| ||||| Sbjct 439321 CTCTTATAAGCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272 >seq5 Length=1351113 Score = 150 bits (166), Expect = 2e-31 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 98511 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 98452 Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 |||||| ||||| ||||||| | || | | || || |||||||| ||||||||| Sbjct 98451 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 98392 Query 78122 TTCTAGATATATTGCCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179 ||| | ||||| || || | ||||| ||||| || || || ||||| | |||||| Sbjct 98391 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 98334 Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || ||||| ||| |||| | || ||| |||| | ||| || || || ||||| | || Sbjct 98333 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 98274 Query 78240 GAAATATAACTTCCACTTGCGCGAATATT--ACTAATGGATATCCCTATTCCTCCTGCCA 78297 || |||||| ||| |||| | ||||| || ||| ||| || || || || | Sbjct 98273 GAGATATAAGCACCATTTGCCCTTATATTTGACACATG--TATTCCAATACCACCAGATG 98216 Query 78298 TCTTAGATATTAGAGC-GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 ||| ||||| | ||| | || | || || | || ||||| || ||| ||| || Sbjct 98215 CCTTTGATATCAAAGCAGTCTTGTGT-AAAGTCTTATAAATACCATCAATAGAGTCTTCT 98157 Query 78357 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAAT 78416 ||| | |||||| || |||| | |||| || || || ||| || || Sbjct 98156 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 98097 Query 78417 GTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGAT 78476 || || || || || |||| | |||| || | || | ||| || |||| ||| Sbjct 98096 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 98037 Query 78477 TCTATGTCCCATTGA--------TGAATTCCTACCGCTACACGCATCAACATATGCTGAG 78528 ||||| | |||| | ||||| | | || || | ||| |||||| ||| | Sbjct 98036 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 97979 Query 78529 GTCTTTCAACCGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 78583 | ||||| || || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 97978 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 97921 Query 78584 AAAACCAAAATA 78595 |||||||||| Sbjct 97920 CCAACCAAAATA 97909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668730533120