Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8 235 8e-57 seq3 188 1e-42 seq5 159 5e-34 >seq8 Length=958696 Score = 235 bits (260), Expect = 8e-57 Identities = 582/878 (66%), Gaps = 14/878 (2%) Strand=Plus/Plus Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 |||||||||| || | || | ||| || ||||| |||||||| | ||||| || || | Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467 || || || |||||||| | || | ||| | |||| | ||| | ||| | ||| Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 335057 Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525 || | | ||| || | | | ||||| || || || || || ||||||| Sbjct 335058 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 335115 Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585 ||||| || ||||||| || || || ||| || ||| | | ||| | ||| || Sbjct 335116 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 335175 Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645 | | | || || | ||||| || ||||| || |||||||| || || | ||| Sbjct 335176 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 335235 Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702 | || ||| |||||| || || |||||| | | || | ||| || | ||| Sbjct 335236 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 335292 Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762 || || |||||||| || | || | || | |||| |||| || ||||| || || Sbjct 335293 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 335352 Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822 || | || | |||||||| || |||| | | |||||||||||| |||||||| ||| Sbjct 335353 TCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 335412 Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882 || || || |||| ||| ||| || | |||||| || ||| | || || Sbjct 335413 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 335472 Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942 || || || | |||||||| | ||||| ||||| ||||| || || || || || Sbjct 335473 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 335532 Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002 ||| ||| ||||| | || ||||| |||||||| ||||| ||| || ||| Sbjct 335533 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 335592 Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062 || || | |||||| || || || ||||| || || ||| | ||| ||||| ||||| Sbjct 335593 TTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 335652 Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | ||| ||| ||||| | || || || ||||| || | ||| | ||| || ||| Sbjct 335653 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 335712 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || ||||| || |||| || ||| | | |||||| || |||||| || || ||| Sbjct 335713 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 335772 Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 || || |||||| || || ||||| ||||| | ||| Sbjct 335773 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 335810 >seq3 Length=1603786 Score = 188 bits (208), Expect = 1e-42 Identities = 576/881 (65%), Gaps = 12/881 (1%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | || ||||| ||||| ||||| || |||| || || ||| Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||| || || || ||||| || || || ||| || ||||| | | Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 ||||| |||||||| ||||| | || ||||||| ||| ||||| || | || Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970 Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || |||||||| || | ||| | ||||| ||| || ||||| || | || || Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 439911 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | || | | | ||| | | ||||||| | || | ||||| ||||| Sbjct 439910 TCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAA 439851 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 || || | ||||||||||| | ||| |||||||| || || || | || ||||| Sbjct 439850 GTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCAT 439791 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 | || ||| || | ||| || || || || || || ||||| || || | ||||| Sbjct 439790 CAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTC 439731 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCATTATGAATCCACCT 46814 || || ||||| || || | ||| || |||| || | |||| | ||||||| || Sbjct 439730 CACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCT 439671 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| | |||||||| || | || || ||||| || ||||| || | || Sbjct 439670 AATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAA 439611 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | | ||| | | ||| || | || || || || || | ||| |||| || || Sbjct 439610 TTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTG 439551 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 |||||||| || || || || ||||| ||||| | ||||| | ||| || ||||| Sbjct 439550 GATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTC 439491 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | | || ||| ||| || || ||||| || ||||| ||||||||| || || Sbjct 439490 AGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 439431 Query 47055 CAATACATGTTTA-ATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTG 47109 | || | | | || ||| || | || ||| | | || | || |||||||||| Sbjct 439430 AAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-TTGTTCCAGTCATGA 439373 Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169 | ||| || || | ||| | ||||||||| ||||| || || ||||| ||| | ||||| Sbjct 439372 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 439313 Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 | ||| || || | || | ||| || |||| ||||| Sbjct 439312 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272 >seq5 Length=1351113 Score = 159 bits (176), Expect = 5e-34 Identities = 406/612 (66%), Gaps = 27/612 (4%) Strand=Plus/Minus Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| || Sbjct 98511 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 98452 Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 |||||| ||||| ||||||| | || | || ||| || |||||||| ||||||||| Sbjct 98451 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 98392 Query 76717 TTCTAGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774 ||| | ||||| || || |||| || ||||| || || || ||||| | |||||| Sbjct 98391 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 98334 Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834 || ||||| ||| |||| | || ||| |||| | || || || |||||||| | || Sbjct 98333 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 98274 Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC---TGCC 76891 || |||||| ||| ||| | ||||| | | || || || || || |||| Sbjct 98273 GAGATATAAGCACCATTTGCCCTTATATTTGACACATGTATTCCAATACCACCAGATGCC 98214 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 || || || | |||| | || || | ||| || || || ||| || || Sbjct 98213 ---TTTGATATCAAAGCAGTCTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCT 98157 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 ||| | |||||| || |||| | |||| || || || ||| ||||| Sbjct 98156 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 98097 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 ||||| || || ||| | || | |||| || | || | ||| || |||| ||||| Sbjct 98096 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 98037 Query 77072 TCTATATCCCATTGA--------TGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 ||||||| |||| | ||||| | | ||| || | ||| |||||| ||| | Sbjct 98036 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 97979 Query 77124 GTCGTTCTACAGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 77178 | ||| ||| || ||| ||| | |||| ||| ||||| || |||| || || Sbjct 97978 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 97921 Query 77179 AAAACCAAAATA 77190 |||||||||| Sbjct 97920 CCAACCAAAATA 97909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934328706560