Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq8 235 8e-57
seq3 188 1e-42
seq5 159 5e-34
>seq8
Length=958696
Score = 235 bits (260), Expect = 8e-57
Identities = 582/878 (66%), Gaps = 14/878 (2%)
Strand=Plus/Plus
Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409
|||||||||| || | || | ||| || ||||| |||||||| | ||||| || || |
Sbjct 334940 ACTTGATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCA 334999
Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGC 76467
|| || || |||||||| | || | ||| | |||| | ||| | ||| | |||
Sbjct 335000 TGAATGGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACA--ACTTTTGAGC 335057
Query 76468 TTTTATTATAGATTTGTATCGCTTC--TCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525
|| | | ||| || | | | ||||| || || || || || |||||||
Sbjct 335058 CTTGACAGTC--TTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAAT 335115
Query 76526 TCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCA 76585
||||| || ||||||| || || || ||| || ||| | | ||| | ||| ||
Sbjct 335116 TCATCACCGTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCT 335175
Query 76586 CCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 76645
| | | || || | ||||| || ||||| || |||||||| || || | |||
Sbjct 335176 TCGTTCTTCTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCT 335235
Query 76646 CGGGTTCTACG---TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702
| || ||| |||||| || || |||||| | | || | ||| || | |||
Sbjct 335236 C---TTGCACGGATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATA 335292
Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762
|| || |||||||| || | || | || | |||| |||| || ||||| || ||
Sbjct 335293 TCTGAGTGCCATGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGG 335352
Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822
|| | || | |||||||| || |||| | | |||||||||||| |||||||| |||
Sbjct 335353 TCAACGTAACGAGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTA 335412
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| || || |||| ||| ||| || | |||||| || ||| | || ||
Sbjct 335413 CCGTTAGTACCAGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATA 335472
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || || | |||||||| | ||||| ||||| ||||| || || || || ||
Sbjct 335473 CCACCAGCGGTCTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATG 335532
Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002
||| ||| ||||| | || ||||| |||||||| ||||| ||| || |||
Sbjct 335533 GAATCTTCCTTCATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCA 335592
Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062
|| || | |||||| || || || ||||| || || ||| | ||| ||||| |||||
Sbjct 335593 TTGAAAAGTGTAGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCC 335652
Query 77063 ATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122
| ||| ||| ||||| | || || || ||||| || | ||| | ||| || |||
Sbjct 335653 AAAACCTTTTCAATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGA 335712
Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182
|| ||||| || |||| || ||| | | |||||| || |||||| || || |||
Sbjct 335713 GGACGTTCAGCAACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAA 335772
Query 77183 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
|| || |||||| || || ||||| ||||| | |||
Sbjct 335773 CCGAAGTAGTTGAATTGGAAATCTCTGTCGTAGACAAT 335810
>seq3
Length=1603786
Score = 188 bits (208), Expect = 1e-42
Identities = 576/881 (65%), Gaps = 12/881 (1%)
Strand=Plus/Minus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|||||||| || || | || ||||| ||||| ||||| || |||| || || |||
Sbjct 440149 TTTTGGTAGTCTGACACTCTCTTTTCGAAGAAATTGGTTTTACCGGCCAAGGAAATGTTT 440090
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
|||||||| || || || ||||| || || || ||| || ||||| | |
Sbjct 440089 TCCATAAAGTCGAATGGGTTAGTGACGTTGTAGTATTTCTTGTTACCTAAAGCAACCAGT 440030
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
||||| |||||||| ||||| | || ||||||| ||| ||||| || | ||
Sbjct 440029 AGTCTGTCTGCAACAAATTCGACGTATTGGTTCATCAAATCAGCGTTCATACCCAATAGA 439970
Query 46519 TTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
|| |||||||| || | ||| | ||||| ||| || ||||| || | || ||
Sbjct 439969 GAAACGGGTAGAGCGTCGATGAAGTATCTCTT-TTCGATCTCAACAGCTTCTGTGATGAT 439911
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| || | | | ||| | | ||||||| | || | ||||| |||||
Sbjct 439910 TCTTTCGACAATCTTTGGATCTGGCTTGTTCTTCAAATGATGGAATAGCAAACAGGCAAA 439851
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||||||||||| | ||| |||||||| || || || | || |||||
Sbjct 439850 GTCGGTGTGCAAACCTTCATCTCTGCAAATCAATTCGTTTGAGAAGGTCAAACCTGGCAT 439791
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
| || ||| || | ||| || || || || || || ||||| || || | |||||
Sbjct 439790 CAAACCCTTCTTCTTCAACCAGAAGATGGCAGCAAAGGAACCAGAGAAAAACACACCTTC 439731
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGG---CATCATTATGAATCCACCT 46814
|| || ||||| || || | ||| || |||| || | |||| | ||||||| ||
Sbjct 439730 CACGGCAGCGAACGCAACCAATCTTTCAGCGTATAGGGCTTCGTCATCACGAATCCATCT 439671
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| | |||||||| || | || || ||||| || ||||| || | ||
Sbjct 439670 AATGGCCCATTGAGCCTTTTCTTTGATTTGTGGAATGGTTTCAATGGCATTCAACAAGAA 439611
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
| | ||| | | ||| || | || || || || || | ||| |||| || ||
Sbjct 439610 TTCGTGTTCCTTAGGATCCTTGATGTAAGTGTCAATCAACAACGAATAAGTTTCGGAGTG 439551
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
|||||||| || || || || ||||| ||||| | ||||| | ||| || |||||
Sbjct 439550 GATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGCACCTC 439491
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| | | || ||| ||| || || ||||| || ||||| ||||||||| || ||
Sbjct 439490 AGCAGAGAAGTTTTCCACCAAGTTTTCGTTCACGATACCATCGGAAGCAGCAAAGAACGC 439431
Query 47055 CAATACATGTTTA-ATAAAATATTTTTC---ATCGGT-AGTCAGTTTATTCCAGTCATTG 47109
| || | | | || ||| || | || ||| | | || | || ||||||||||
Sbjct 439430 AAGCAC-TCTGGAGATGAAAAATCTCTCGTTCTCGTTCATTCTG-TTGTTCCAGTCATGA 439373
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | ||||||||| ||||| || || ||||| ||| | |||||
Sbjct 439372 AGATCCTTGGACAAATCGATTTCTTCAGCAGTCCAAAAAGAGGCCTCGGCTCTCTTATAA 439313
Query 47170 ATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
| ||| || || | || | ||| || |||| |||||
Sbjct 439312 GCCTCCCAGATTTCGTGGTACTTGATTGGGAAAAGCACAAA 439272
>seq5
Length=1351113
Score = 159 bits (176), Expect = 5e-34
Identities = 406/612 (66%), Gaps = 27/612 (4%)
Strand=Plus/Minus
Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656
||| |||| |||||| ||||| || |||||||||||| ||||| ||||||| ||
Sbjct 98511 AACACGTTGCATAAAAAGATCCGGAATCCATAGAGCATAAAATAAGTCTCGGGCCCTCAT 98452
Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716
|||||| ||||| ||||||| | || | || ||| || |||||||| |||||||||
Sbjct 98451 TTCTTCTTTTCCGTGATTCTTTCTTAGTTGTAAGAAGTCAATAATATCCCCATGCCATGG 98392
Query 76717 TTCTAGATATATCGCCATAA--CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTG 76774
||| | ||||| || || |||| || ||||| || || || ||||| | ||||||
Sbjct 98391 TTCCAAGTATAT--ACAAAAGGCACCAGGGCGTTTGTTCCCACCTTGATCGACATATCTT 98334
Query 76775 GCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCA 76834
|| ||||| ||| |||| | || ||| |||| | || || || |||||||| | ||
Sbjct 98333 GCTGTGTTGTTAAAAACCCGCAGCATAGGAACTAAACCATTTGAAGTACCATTCGACCCT 98274
Query 76835 GAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCC---TGCC 76891
|| |||||| ||| ||| | ||||| | | || || || || || ||||
Sbjct 98273 GAGATATAAGCACCATTTGCCCTTATATTTGACACATGTATTCCAATACCACCAGATGCC 98214
Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951
|| || || | |||| | || || | ||| || || || ||| || ||
Sbjct 98213 ---TTTGATATCAAAGCAGTCTTGTGTAAAGTCTTATAAATACCATCAATAGAGTCTTCT 98157
Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011
||| | |||||| || |||| | |||| || || || ||| |||||
Sbjct 98156 TCCATAGCCACAAGAAAGCATGATGACAAATATTGATTTACTGTACCGCTATTGAACAAA 98097
Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071
||||| || || ||| | || | |||| || | || | ||| || |||| |||||
Sbjct 98096 GTAGGTGAAGCGTGAATAAAATACTTTTGTGACATTAATTGGTAAGTCTCAAGTACTGCA 98037
Query 77072 TCTATATCCCATTGA--------TGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123
||||||| |||| | ||||| | | ||| || | ||| |||||| ||| |
Sbjct 98036 TCTATAT--CATTAAATGGTCCGTGAATAGCAAGAGCAACTCTCATGAACATAAACTGCG 97979
Query 77124 GTCGTTCTACAGT---CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAA--GTTTT 77178
| ||| ||| || ||| ||| | |||| ||| ||||| || |||| || ||
Sbjct 97978 GAGTTTCATAAGTTTCCTCATTGTTTCTCTTCATCAAATATGA--CTTACAAAGTGTCTT 97921
Query 77179 AAAACCAAAATA 77190
||||||||||
Sbjct 97920 CCAACCAAAATA 97909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934328706560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |