Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq5 89.7 4e-13 >seq2 Length=1698977 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 111088 AAGAGTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAA 111147 |||| |||||||||||||| |||||||| ||||| || || || ||||| || ||||| Sbjct 908816 AAGACATTAAAAATGCAAATCTTTGTCAAGACGTTAACAGGTAAGACCATCACTTTGGAA 908875 Query 111148 ACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTT 111207 ||| | || || ||| | | || || || || || || ||||| || Sbjct 908876 GTTGAATCTTCTGACACTATTGACAATGTGAAGTCTAAGATCCAAGATAAGGAAGGTATT 908935 Query 111208 CCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATG 111267 || || |||||||| | |||| |||||| || ||||| ||||| | |||| | Sbjct 908936 CCTCCAGACCAACAAAGATTGATTTTTGCGGGTAAGCAATTAGAAGACGGAAGAACTCTA 908995 Query 111268 GCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||| || || || ||||| ||||||||||| || ||||| ||| | || | ||||| Sbjct 908996 TCCGACTACAACATCCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 909054 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || ||||| || ||||| ||||||||||| || ||||| ||| | Sbjct 909056 ATGCAAATCTTCGTCAAGACTTTGACAGGCAAAACCATCACTTTGGAAGTTGAATCTTCT 909115 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | | || || || ||| ||||| ||||| |||| || ||| Sbjct 909116 GACACTATTGACAATGTGAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 909175 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || |||||||| ||||| | |||| | |||| || || Sbjct 909176 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGACGGAAGAACTCTATCCGACTACAAC 909235 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||||||||| || ||||| ||| | || | ||||| Sbjct 909236 ATTCAAAAGGAATCTACACTTCACTTAGTCTTGAGATTGAGAGGTGG 909282 >seq5 Length=1351113 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| ||||| || | || || || || |||||| ||||| ||| | | Sbjct 1192624 ATGCAAATTTTCGTCAAGACCCTAACTGGTAAGACTATTACCTTGGAAGTCGAATCTTCC 1192683 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | | || || || || ||||| ||||| |||| || ||| Sbjct 1192684 GACACCATTGACAATGTCAAGTCTAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAA 1192743 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | || | ||| || || |||||||||||| || |||| || | || || || Sbjct 1192744 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1192803 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| |||||||| || || || || ||| | || | ||||| Sbjct 1192804 ATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 1192850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421811158873408