Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10- 26] 8 sequences; 10,914,453 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 167 5e-36 seq3 150 4e-31 seq5 149 1e-30 seq8 86.0 1e-11 >seq2 Length=1698977 Score = 167 bits (184), Expect = 5e-36 Identities = 152/192 (79%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | || || | || || |||| ||| || || ||||| Sbjct 909475 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 909416 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 909415 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 909356 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| || Sbjct 909355 GTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 909296 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 909295 GAAGATTTGCAT 909284 Score = 154 bits (170), Expect = 3e-32 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||| | || || | || || |||| ||| || || ||||| Sbjct 909019 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAA 908960 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||| ||||||||||| | || || | Sbjct 908959 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATT 908900 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | |||||| |||||||| || || ||||| || Sbjct 908899 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGAC 908840 Query 283088 GAATATCTGCATTTT 283102 || || |||||||| Sbjct 908839 AAAGATTTGCATTTT 908825 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||| | || || | || || |||| |||||| || ||||| Sbjct 909247 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 909188 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 909187 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 909128 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | |||||| || || || ||||||||||| || Sbjct 909127 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGAC 909068 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 909067 GAAGATTTGCAT 909056 >seq3 Length=1603786 Score = 150 bits (166), Expect = 4e-31 Identities = 143/183 (78%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | ||| || || ||||| Sbjct 1548466 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 1548525 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||| ||||| | || || | Sbjct 1548526 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 1548585 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| || Sbjct 1548586 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 1548645 Query 283088 GAA 283090 ||| Sbjct 1548646 GAA 1548648 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085 || ||||| || || | |||||||| | || || ||||||| || ||||| |||||| Sbjct 339109 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 339168 Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145 || || || || || | ||| || | | | |||||| | || | || |||||| Sbjct 339169 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 339228 Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 | | ||||| |||| || |||| |||||||||||| | ||||| ||| || || Sbjct 339229 AACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 339284 >seq5 Length=1351113 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | ||||| || | ||| || || ||||| Sbjct 1192815 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 1192756 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||||||||| |||||||| ||||||||||||||||| | || || | Sbjct 1192755 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 1192696 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || ||||| |||| ||||||||| | || || |||||||| || | ||||| || Sbjct 1192695 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 1192636 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 1192635 GAAAATTTGCAT 1192624 >seq8 Length=958696 Score = 86.0 bits (94), Expect = 1e-11 Identities = 180/263 (68%), Gaps = 9/263 (3%) Strand=Plus/Plus Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485 ||||| ||||| || || ||| ||||| | || || ||| || |||| || ||| Sbjct 154836 AAAATCGACCCATACATGAACCTCGATGCAGGTACAATGTCTCCTTTGGAACACGGTGAA 154895 Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545 || ||| | | ||||||| ||| |||||| ||||| |||| |||| ||||||| Sbjct 154896 TGTTTTGTGTTGAACGATGGTGGTGAGACCGATTTGGATTTGGGTAACTATGAACGTT-- 154953 Query 301546 ACTTCA---TTAACCCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601 |||| | ||| | |||| | | || ||| | || ||||| | ||||| | | Sbjct 154954 ACTTGAACGTTA--CTTTAACCAGAGACCATAACATCACTACTGGTAAGGTTTACTCTCA 155011 Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661 ||||| | || ||||| | ||| ||| | || ||||| |||||||||||||| || Sbjct 155012 TGTTATTGCCAAGGAACGTAAGGGTGATTATTTGGGTAAGACCGTGCAAGTTGTTCCTCA 155071 Query 301662 CATCACCGATGAAATCAAAAGAA 301684 | ||| | ||||| | ||||| Sbjct 155072 TTTGACCAACGAAAT-ACAAGAA 155093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739092709232