Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001854445.1_202016-10-
26] 8 sequences; 10,914,453 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 167 5e-36
seq3 150 4e-31
seq5 149 1e-30
seq8 86.0 1e-11
>seq2
Length=1698977
Score = 167 bits (184), Expect = 5e-36
Identities = 152/192 (79%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | || || | || || |||| ||| || || |||||
Sbjct 909475 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAA 909416
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 909415 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 909356
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||||||||| | |||||| |||||||| ||||||||||| ||
Sbjct 909355 GTCAATAGTGTCAGAAGATTCGACTTCCAAAGTGATAGTCTTACCTGTCAAAGTCTTGAC 909296
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 909295 GAAGATTTGCAT 909284
Score = 154 bits (170), Expect = 3e-32
Identities = 151/195 (77%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | || || | || || |||| ||| || || |||||
Sbjct 909019 TTCCTTTTGGATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGCTTACCCGCAAA 908960
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||| ||||||||||| | || || |
Sbjct 908959 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTTAGACTTCACATT 908900
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| | |||||| |||||||| || || ||||| ||
Sbjct 908899 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCTGTTAACGTCTTGAC 908840
Query 283088 GAATATCTGCATTTT 283102
|| || ||||||||
Sbjct 908839 AAAGATTTGCATTTT 908825
Score = 152 bits (168), Expect = 1e-31
Identities = 149/192 (78%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||| | || || | || || |||| |||||| || |||||
Sbjct 909247 TTCCTTTTGAATGTTGTAGTCGGATAGAGTTCTTCCGTCTTCTAATTGTTTACCAGCAAA 909188
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 909187 AATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTAGACTTCACATT 909128
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| ||||| | |||||| || || || ||||||||||| ||
Sbjct 909127 GTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTGCCTGTCAAAGTCTTGAC 909068
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 909067 GAAGATTTGCAT 909056
>seq3
Length=1603786
Score = 150 bits (166), Expect = 4e-31
Identities = 143/183 (78%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | || || || | ||| || || |||||
Sbjct 1548466 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 1548525
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||| ||||| | || || |
Sbjct 1548526 GATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATT 1548585
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| ||
Sbjct 1548586 GTCAATGGTGTCAGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGAC 1548645
Query 283088 GAA 283090
|||
Sbjct 1548646 GAA 1548648
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 317026 GTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCA 317085
|| ||||| || || | |||||||| | || || ||||||| || ||||| ||||||
Sbjct 339109 GTTGGGAAACCGTCAACTTGACCGTTGGCGATAGCTCTCATCAAGGTAGACTTACCAGCA 339168
Query 317086 CCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTC 317145
|| || || || || | ||| || | | | |||||| | || | || ||||||
Sbjct 339169 CCGTTTGGACCACACAAACCGTATCTTCTGGCTCTCTTCAATCTCAATTGAGTCTTGTTC 339228
Query 317146 AGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| | ||||| |||| || |||| |||||||||||| | ||||| ||| || ||
Sbjct 339229 AACAAGATCTTGGCACCGTAAGCCAAAGAGAACTCACAGTTACACAAGTCTTCACC 339284
>seq5
Length=1351113
Score = 149 bits (164), Expect = 1e-30
Identities = 148/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||||| | || | ||||| || | ||| || || |||||
Sbjct 1192815 TTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 1192756
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||||||||| |||||||| ||||||||||||||||| | || || |
Sbjct 1192755 GATCAATCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTAGACTTGACATT 1192696
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || ||||| |||| ||||||||| | || || |||||||| || | ||||| ||
Sbjct 1192695 GTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATAGTCTTACCAGTTAGGGTCTTGAC 1192636
Query 283088 GAATATCTGCAT 283099
||| || |||||
Sbjct 1192635 GAAAATTTGCAT 1192624
>seq8
Length=958696
Score = 86.0 bits (94), Expect = 1e-11
Identities = 180/263 (68%), Gaps = 9/263 (3%)
Strand=Plus/Plus
Query 301426 AAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAA 301485
||||| ||||| || || ||| ||||| | || || ||| || |||| || |||
Sbjct 154836 AAAATCGACCCATACATGAACCTCGATGCAGGTACAATGTCTCCTTTGGAACACGGTGAA 154895
Query 301486 GTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTC 301545
|| ||| | | ||||||| ||| |||||| ||||| |||| |||| |||||||
Sbjct 154896 TGTTTTGTGTTGAACGATGGTGGTGAGACCGATTTGGATTTGGGTAACTATGAACGTT-- 154953
Query 301546 ACTTCA---TTAACCCTTAAGC-GTGAAAGTAATTTTACGACTGGCCAAGTTTATTTAAA 301601
|||| | ||| | |||| | | || ||| | || ||||| | ||||| | |
Sbjct 154954 ACTTGAACGTTA--CTTTAACCAGAGACCATAACATCACTACTGGTAAGGTTTACTCTCA 155011
Query 301602 AGTTATCGAAAATGAACGCGAAGGTAGCTATCTCGGAAAGACGGTGCAAGTTGTTCCCCA 301661
||||| | || ||||| | ||| ||| | || ||||| |||||||||||||| ||
Sbjct 155012 TGTTATTGCCAAGGAACGTAAGGGTGATTATTTGGGTAAGACCGTGCAAGTTGTTCCTCA 155071
Query 301662 CATCACCGATGAAATCAAAAGAA 301684
| ||| | ||||| | |||||
Sbjct 155072 TTTGACCAACGAAAT-ACAAGAA 155093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739092709232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |