Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 127 4e-24 >seq2 Length=2687137 Score = 127 bits (140), Expect = 4e-24 Identities = 181/255 (71%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 319776 AATGAAGTCAATGATAGCCGTGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 319835 ||||||||||| | | |||| | || || || |||| ||||| || ||||| | Sbjct 122127 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 122068 Query 319836 AGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCAT 319895 |||| | | ||||| ||| ||||| ||||||| || ||||| ||||||| | ||| Sbjct 122067 AGTTCTACATTCATCCTGAGATGGGAAGCCTTCAACTTGACCGTTGGCAATAGCTCTCAT 122008 Query 319896 CAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAG 319955 || ||| || ||||| || ||||| || ||||||||||| || || | | | ||||| Sbjct 122007 CAAGGTAGACTTACCAGCACCGTTGGGACCACACAGACCATAACGTCTAGCTCTCTTCAG 121948 Query 319956 GTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATC 320015 ||| | || |||||||| | || || |||| || ||||| || || ||||| | Sbjct 121947 ACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGTT 121888 Query 320016 ACACAGATCCTCACC 320030 ||| || || ||||| Sbjct 121887 ACATAGGTCTTCACC 121873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823850912930