Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 196 5e-45
>seq2
Length=2687137
Score = 196 bits (216), Expect = 5e-45
Identities = 480/722 (66%), Gaps = 8/722 (1%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| ||| | |||||||| ||||| || || || | | ||| || ||||
Sbjct 442717 TTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTCT 442776
Query 16734 CCATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791
||||||||||||| ||||| || | || | | |||| || ||||| | | |
Sbjct 442777 CCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTT--TGTTGCCCAGAGCTACCAG 442834
Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851
|| |||||| || || || || | ||| |||||||| || |||||||||||| | |
Sbjct 442835 TAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAA 442894
Query 16852 ACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
|| |||||||| || || || ||| || || || | || || || |||||||
Sbjct 442895 GGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAAT 442954
Query 16912 ACTAGCAACTCGTTCCT--CGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCG 16969
| |||| ||||| | | | ||| |||| ||| || || | || || ||
Sbjct 442955 CTTTTCAACGATTTCCTCACTGGCTCTGT-TGTTCAAG-TGAGAGAATAGCAAGCAAGCA 443012
Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029
|| ||| |||||||| || ||||||| ||||| || || || || ||||| || |||
Sbjct 443013 AAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGC 443072
Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089
|| |||| || || ||||| || || | ||||| || || |||||||| |||||
Sbjct 443073 ATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCT 443132
Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149
|| || | || || || | || ||||| ||| || || || | | |||||||
Sbjct 443133 TCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCAT 443192
Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAAT 17209
|| |||| || || |||| || || || || || || ||||| || || ||
Sbjct 443193 CTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAG 443252
Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269
|| ||| | | | || | || || ||||| || | | ||| ||||||||
Sbjct 443253 AATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAG 443312
Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329
|| ||||||||||| || ||||| |||||||| ||| ||||| | | ||||||
Sbjct 443313 TGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACC 443372
Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAAC 17389
|| || ||| |||| | | |||||| || || || || || || || |||||
Sbjct 443373 TCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAG 443432
Query 17390 GC 17391
||
Sbjct 443433 GC 443434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545528837480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |