Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2 221 1e-52
>seq2
Length=2687137
Score = 221 bits (244), Expect = 1e-52
Identities = 571/863 (66%), Gaps = 13/863 (2%)
Strand=Plus/Plus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
||||||||||| ||| | |||||||||||||| || || || | ||||| || || |
Sbjct 442717 TTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTCT 442776
Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029
|||| |||||||| ||||| || | || | | | || | | ||||| | |
Sbjct 442777 CCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTG--TTGCCCAGAGCTACCAG 442834
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089
|| |||||| || || || || | ||| || ||||| ||| ||| || ||||| | |
Sbjct 442835 TAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAA 442894
Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149
|| |||||||| | ||| || || || ||| ||| | || || ||| |||| ||
Sbjct 442895 GGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAAT 442954
Query 16150 ATCGGTGGCTCGTGTTTCAGACGGTGTATG--GTTTAGGTGTTTAAACATTAGACACGCG 16207
| | || || | || | | || ||| | ||| || | | || ||
Sbjct 442955 CTT--TTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCA 443012
Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267
|||||| |||| |||||| ||||||| ||||| || ||||| || || || ||||||
Sbjct 443013 AAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGC 443072
Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327
|| |||| || || |||||||| || | ||| || || ||||||||||| |||||
Sbjct 443073 ATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCT 443132
Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387
||||||| || || || | || ||||| ||| || |||||| | || |||||||
Sbjct 443133 TCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCAT 443192
Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAAT 16447
|| |||| || || |||| ||| ||||| || || || ||||| || |||||
Sbjct 443193 CTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAG 443252
Query 16448 TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAG 16507
|| ||| | ||| | || || |||||||||| || ||| |||| |||
Sbjct 443253 AATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAG 443312
Query 16508 TGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACT 16567
|| |||||||| || || ||||| || || || ||| || || | | ||| ||
Sbjct 443313 TGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACC 443372
Query 16568 TCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAAC 16627
|| || || |||| ||| || ||||| || ||||| ||| |||||||||||
Sbjct 443373 TCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAA- 443431
Query 16628 GCCAATATGTGCTTA-ATGAAATATTTTTC---GTCAGATGTAAGAATATGCCAATCTTT 16683
| ||| | | | || ||||| || || ||| || || ||| ||| || |
Sbjct 443432 GGCAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATG 443491
Query 16684 TAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATA 16743
||||| || | || | ||| || | ||||||||| ||| | |||| ||| ||
Sbjct 443492 CAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTA 443551
Query 16744 CATTTTCCAAATATCATTGTATT 16766
||||| ||| || || | ||||
Sbjct 443552 CATTTGCCAGATGTCGTGATATT 443574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414329680520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |