Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2 214 2e-50
>seq2
Length=2687137
Score = 214 bits (236), Expect = 2e-50
Identities = 569/860 (66%), Gaps = 21/860 (2%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
||||| || ||| |||||||||||| ||||| || || || || | || ||||| ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 16004 TCCATAAAATCAAAAGGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCA 16058
||||| |||||||| ||||| | || ||| | | ||| | || ||| | |
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACT--TTTTTGTTGC---CCAGAGCTA 442830
Query 16059 ACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTA 16118
|| || |||||| || || || || | |||||| ||| || ||||||||||| |
Sbjct 442831 CCAGTAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCA 442890
Query 16119 TTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGA 16178
|| |||||| | || ||||| || | ||||||| || | || || || | |
Sbjct 442891 GCAAGGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAA 442950
Query 16179 TTATATCTCTTACTACACTATT-TAACGGAGGGTTTAAT--AAGTGTTTAAACATTATAC 16235
| || | || | || | | | || | | | | ||||| || | | |
Sbjct 442951 TAATCT---TTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGC 443007
Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295
||||||| || || |||||||| || || | || | ||| || || || || | ||
Sbjct 443008 AAGCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAAC 443067
Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355
||||||| || |||| ||||| | ||| || |||| || || || || |||||||| |
Sbjct 443068 CTGGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGA 443127
Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415
|||||||||| || || || |||||||| || ||| || || || | | | |
Sbjct 443128 TACCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAA 443187
Query 16416 tccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAA 16475
||||| | | ||||| | || |||| ||| | ||| ||| |||| || ||||| |
Sbjct 443188 TCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGA 443247
Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535
| || | | |||||| |||| || |||||||| || | || || |||
Sbjct 443248 ACAAGAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTT 443307
Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595
| || || || |||||||| || |||||||| ||||| ||| | ||||||| | ||
Sbjct 443308 CGGAGTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTT 443367
Query 16596 GTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAA 16655
| || |||| | || |||| | || ||||| || || || ||||| || ||||
Sbjct 443368 GAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAA 443427
Query 16656 AAAACGCAAGTATGTGTTTA-ATAAAAtttttttCGTTATC--TGA-AAGTTTTAACCAG 16711
|||| ||||| | | | | ||||||| || || || || | | | | || ||||
Sbjct 443428 AAAAGGCAAG-AACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAG 443486
Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTT 16771
||| ||||| ||| || || | || || |||||||||| ||||| | |||| |
Sbjct 443487 TCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGT 443546
Query 16772 TTATACATTTTCCATATGTC 16791
|| ||||||| ||| |||||
Sbjct 443547 TTGTACATTTGCCAGATGTC 443566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511936404600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |