Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 230 2e-55
>seq2
Length=2687137
Score = 230 bits (254), Expect = 2e-55
Identities = 573/863 (66%), Gaps = 13/863 (2%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||| |||||| ||||| |||||||| || ||||| ||| || || ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031
||||| |||||||||||||| || ||| | ||||||| | || || ||| ||
Sbjct 442776 TCCATGAAATCAAATGGATTGGT-GACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAG 442834
Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091
|| |||||| |||| |||||||| ||| || |||| || || ||||| || | |
Sbjct 442835 TAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAA 442894
Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151
||||||| || || || || |||||| || |||||||| | ||||
Sbjct 442895 GGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTC---TGTAAT 442951
Query 14152 AATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 14208
|||| | || ||||| | | | | || | || || | || || ||
Sbjct 442952 AATCTTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGC 443011
Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268
||| || || | || |||||||| | |||||| || || || || || || |||||
Sbjct 443012 AAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGG 443071
Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328
||| | |||| ||||| ||||| || || | |||||| || || |||||||| || ||
Sbjct 443072 CATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACC 443131
Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388
||||| ||||| || || | || ||||| | ||| | || | | | | |||||
Sbjct 443132 TTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCA 443191
Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448
| | | ||||| |||| |||| ||| ||| | || || || || ||||| || ||
Sbjct 443192 TCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAA 443251
Query 14449 ATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14508
||| ||||| | | | ||||| |||||||| | || || |||| ||
Sbjct 443252 GAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGA 443311
Query 14509 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14568
||| ||||| ||||| || |||||||| ||||||||| | ||||| | ||| ||
Sbjct 443312 GTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAAC 443371
Query 14569 CTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14628
||| | | || |||| ||||||||||||| || ||||||||| || ||||||||
Sbjct 443372 CTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAA 443431
Query 14629 TGCCAATATGTTTTTA-ATAAAGTATTGCTC---TTCATTGCTGAGTTTTTTCCAATCGG 14684
| ||| | | | | ||||| || | ||| || || | | || ||||| ||
Sbjct 443432 -GGCAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCAT 443490
Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744
|||||||| | |||| ||| || | |||||||| ||| | || | ||| |
Sbjct 443491 GCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGT 443550
Query 14745 ACATTACCCATATTTCTTTATAT 14767
||||| ||| || || | ||||
Sbjct 443551 ACATTTGCCAGATGTCGTGATAT 443573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345533677480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |