Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq2 230 2e-55 >seq2 Length=2687137 Score = 230 bits (254), Expect = 2e-55 Identities = 573/863 (66%), Gaps = 13/863 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| |||||| ||||| |||||||| || ||||| ||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| |||||||||||||| || ||| | ||||||| | || || ||| || Sbjct 442776 TCCATGAAATCAAATGGATTGGT-GACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAG 442834 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || |||||| |||| |||||||| ||| || |||| || || ||||| || | | Sbjct 442835 TAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAA 442894 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 ||||||| || || || || |||||| || |||||||| | |||| Sbjct 442895 GGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTC---TGTAAT 442951 Query 14152 AATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGC 14208 |||| | || ||||| | | | | || | || || | || || || Sbjct 442952 AATCTTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGC 443011 Query 14209 AAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGG 14268 ||| || || | || |||||||| | |||||| || || || || || || ||||| Sbjct 443012 AAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGG 443071 Query 14269 CATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCC 14328 ||| | |||| ||||| ||||| || || | |||||| || || |||||||| || || Sbjct 443072 CATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACC 443131 Query 14329 CTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCA 14388 ||||| ||||| || || | || ||||| | ||| | || | | | | ||||| Sbjct 443132 TTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCA 443191 Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | | | ||||| |||| |||| ||| ||| | || || || || ||||| || || Sbjct 443192 TCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAA 443251 Query 14449 ATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14508 ||| ||||| | | | ||||| |||||||| | || || |||| || Sbjct 443252 GAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGA 443311 Query 14509 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14568 ||| ||||| ||||| || |||||||| ||||||||| | ||||| | ||| || Sbjct 443312 GTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAAC 443371 Query 14569 CTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14628 ||| | | || |||| ||||||||||||| || ||||||||| || |||||||| Sbjct 443372 CTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAA 443431 Query 14629 TGCCAATATGTTTTTA-ATAAAGTATTGCTC---TTCATTGCTGAGTTTTTTCCAATCGG 14684 | ||| | | | | ||||| || | ||| || || | | || ||||| || Sbjct 443432 -GGCAAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCAT 443490 Query 14685 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTAT 14744 |||||||| | |||| ||| || | |||||||| ||| | || | ||| | Sbjct 443491 GCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGT 443550 Query 14745 ACATTACCCATATTTCTTTATAT 14767 ||||| ||| || || | |||| Sbjct 443551 ACATTTGCCAGATGTCGTGATAT 443573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345533677480