Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2 176 9e-39
seq1 86.0 1e-11
>seq2
Length=2687137
Score = 176 bits (194), Expect = 9e-39
Identities = 320/464 (69%), Gaps = 11/464 (2%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|||||||| ||||| |||||||| ||||||||| || | ||||| || || ||||||
Sbjct 443152 GTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGG 443093
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||| || |||| ||| | |||| |||||||||| | |||| || ||
Sbjct 443092 TTGAAAAAGAGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAT 443033
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
||||| | || ||||||||| ||| |||| || | ||| | | | |
Sbjct 443032 GAAGGATTACACACCGACTTTGCTTGCTTGCTATTCTCTCAC----TTGA--ACAACAGA 442979
Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
| || || || |||||| || | || || || ||| |||||| || ||
Sbjct 442978 GCCAGTGAGGAAATCGTTGAAAAGATTATTACAGAGGCTGTCGAGATTGAAAAAAGATAC 442919
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
|||||| | | || |||||| || ||||||||||||||| |||||| |||||||
Sbjct 442918 TTCACAGATGCTCTTCCTGTTTCCTTGCTGGGAATGAACTGCAGCTTGATGTGCCAGTAT 442859
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGT 102273
|||| || || || |||| |||| |||| | |||| | | ||||| || || ||
Sbjct 442858 GTTGAGTTCGTTGCTGATAGACTACTGGTAGCTCTGGGCAACAAAAAAGTG-TACAACGT 442800
Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333
||||| || || |||||||| || ||||| | | |||||||||||| || ||
Sbjct 442799 CACCAATCCATTTGATTTCATGGAGAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGA 442740
Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377
||||||||| | || || ||| || |||||||||||||
Sbjct 442739 AAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 442696
>seq1
Length=3325186
Score = 86.0 bits (94), Expect = 1e-11
Identities = 183/271 (68%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829
|| ||||| ||| | || | ||| |||||||| ||||| || | || ||||| |
Sbjct 2235601 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCAA 2235542
Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889
||||||||||||||| ||||| ||||| | | | | | | ||| || || || |
Sbjct 2235541 AGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACAT 2235482
Query 94890 TTG-GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948
||| ||||| | || ||| |||||||| || || || || || || ||||| | |
Sbjct 2235481 TTGTGGGTGAG-GGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAAATACTTCT 2235423
Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008
||| | | || |||||||| || | ||||| || ||||| |||| ||
Sbjct 2235422 GACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATAG 2235363
Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039
| ||||||||||| | || ||||| || ||
Sbjct 2235362 CGACACGCATAATTAAGTGTTGAGGACGTTC 2235332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583860530505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |