Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 176 9e-39 seq1 86.0 1e-11 >seq2 Length=2687137 Score = 176 bits (194), Expect = 9e-39 Identities = 320/464 (69%), Gaps = 11/464 (2%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| |||||||| ||||||||| || | ||||| || || |||||| Sbjct 443152 GTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGG 443093 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | || || || ||| || |||| ||| | |||| |||||||||| | |||| || || Sbjct 443092 TTGAAAAAGAGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGAT 443033 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||| | || ||||||||| ||| |||| || | ||| | | | | Sbjct 443032 GAAGGATTACACACCGACTTTGCTTGCTTGCTATTCTCTCAC----TTGA--ACAACAGA 442979 Query 102098 TCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | || || || |||||| || | || || || ||| |||||| || || Sbjct 442978 GCCAGTGAGGAAATCGTTGAAAAGATTATTACAGAGGCTGTCGAGATTGAAAAAAGATAC 442919 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 |||||| | | || |||||| || ||||||||||||||| |||||| ||||||| Sbjct 442918 TTCACAGATGCTCTTCCTGTTTCCTTGCTGGGAATGAACTGCAGCTTGATGTGCCAGTAT 442859 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG-ACTAGAAAAGCACTATAATGT 102273 |||| || || || |||| |||| |||| | |||| | | ||||| || || || Sbjct 442858 GTTGAGTTCGTTGCTGATAGACTACTGGTAGCTCTGGGCAACAAAAAAGTG-TACAACGT 442800 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 ||||| || || |||||||| || ||||| | | |||||||||||| || || Sbjct 442799 CACCAATCCATTTGATTTCATGGAGAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGA 442740 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTA 102377 ||||||||| | || || ||| || ||||||||||||| Sbjct 442739 AAAGAGAGTTTCTGATTACCAAAAGGCAGGTGTCATGGCTTCTA 442696 >seq1 Length=3325186 Score = 86.0 bits (94), Expect = 1e-11 Identities = 183/271 (68%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 94770 ATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAG 94829 || ||||| ||| | || | ||| |||||||| ||||| || | || ||||| | Sbjct 2235601 ATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCAA 2235542 Query 94830 AGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAG 94889 ||||||||||||||| ||||| ||||| | | | | | | ||| || || || | Sbjct 2235541 AGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACAT 2235482 Query 94890 TTG-GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCC 94948 ||| ||||| | || ||| |||||||| || || || || || || ||||| | | Sbjct 2235481 TTGTGGGTGAG-GGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAAATACTTCT 2235423 Query 94949 TCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAG 95008 ||| | | || |||||||| || | ||||| || ||||| |||| || Sbjct 2235422 GACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATAG 2235363 Query 95009 CCACACGCATAATCATGTCCTGAGGGCGCTC 95039 | ||||||||||| | || ||||| || || Sbjct 2235362 CGACACGCATAATTAAGTGTTGAGGACGTTC 2235332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583860530505