Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 232 6e-56 seq2 150 2e-31 >seq1 Length=3325186 Score = 232 bits (256), Expect = 6e-56 Identities = 1163/1830 (64%), Gaps = 47/1830 (3%) Strand=Plus/Minus Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894 || ||||| ||||| |||| || |||| || || || ||||| ||||||| ||| Sbjct 2237061 TAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTA 2237002 Query 36895 GCGTATGTAGGATT-ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACC 36953 | || ||| ||| | | || ||| || ||| ||| || ||| | || Sbjct 2237001 CCCATAGTTGGAGACATC-AGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGA 2236943 Query 36954 TCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013 |||||| || ||||| || | ||| |||||||||||||||||||| || ||||| | Sbjct 2236942 TCTGTCCGCAGCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAG 2236883 Query 37014 TTGTTTTATATTATCTGGTAAATCT-----AAATGTTGAATAGAACCATTATGTAACACA 37068 ||| | | || || ||| | |||| |||||| || || || | | | | Sbjct 2236882 GCCTTTGAGTTGCTCAGG--AATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATG 2236825 Query 37069 ATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGT 37128 || ||| || |||| || | ||| | | | | ||| || | ||||| || Sbjct 2236824 ATATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAA 2236765 Query 37129 GGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATAT 37188 ||||| |||| || || ||||||| |||||| | | || || || || |||||| Sbjct 2236764 GGATTAACAATTTGGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAA 2236705 Query 37189 GGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCT 37248 ||||| | |||| || | || || || || || || || ||||||||||| ||||| Sbjct 2236704 GGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCA 2236645 Query 37249 ATTAGAAGGCTATTTCTCAATCCATGT-GTATTAATTCTCTTTTTTAGTTCATTCCAATC 37307 | |||||| ||||| | || ||| | | |||| | ||| ||| | ||| || Sbjct 2236644 ACTAGAAGCGAGTTTCTAAGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTC 2236586 Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367 ||| | || | || || || ||||| |||||| || | |||||| | | ||||| Sbjct 2236585 CCACAGCTCAGAGGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGG 2236526 Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAG 37427 |||| | | | | || || |||| ||| | |||| ||||| | ||| | Sbjct 2236525 AGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAA 2236466 Query 37428 TGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATC 37487 || ||| || || ||||||||||| || ||||| | | || || ||| ||| Sbjct 2236465 GGCTCCATGGTAGATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATC 2236406 Query 37488 GAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 |||| | ||| || || ||||||| ||||| |||||||| | | | || || Sbjct 2236405 AAATGGGATTCTCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGG 2236346 Query 37548 TCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTAT 37607 ||||| | | || ||||| | ||| || || || || || | || || || Sbjct 2236345 TCTATTACGCATGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAAT 2236286 Query 37608 TTTATTTAGATTTTTAACTAGT----ATTTTCGTAATTA--------TTCTCAAC-TTGT 37654 | | || | || || ||| | ||||| || || |||| |||| Sbjct 2236285 TCTGTTCAAGTT----ACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGT 2236230 Query 37655 -CGAACA-TAAATA-CGTTATTATTAACAAATTTACTCAACGA--AATAGATCCTAGATT 37709 | |||| | | || | | | | |||||| || | || |||||| | | || Sbjct 2236229 ACCAACAGTGAGTATCATCGGTTTCAACAAAGG--CTGGAAGAGCAATAGAAGCCAAGTT 2236172 Query 37710 ACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGA 37769 ||| |||||| ||| ||| | | | | | | |||||| ||| || ||| || Sbjct 2236171 ACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGA 2236112 Query 37770 TCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTAT 37829 | |||| ||||| || | || |||| ||| || ||||||| ||| ||||| | || Sbjct 2236111 TTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACAT 2236052 Query 37830 ATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTG-CTT 37888 | || || || |||| | || ||||||| || | | ||| || ||| | | ||| Sbjct 2236051 GAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGCGTACCA-AAGCTTTTGGGCTT 2235993 Query 37889 TAACGATCG--CTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATC 37946 | | | | ||| | ||| || ||||||| | || | || | ||| || Sbjct 2235992 TGATGGTTTGTCTTCCACGACCTTCCTT--TTCGTATCTTTCGTACAGTTCTTCAAATTC 2235935 Query 37947 ATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTC 38006 || || | || ||| | || ||| || | |||| | | || | |||||| | Sbjct 2235934 ATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCC 2235875 Query 38007 ATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTT 38066 || | ||| || | || ||| || | |||||| | ||||| || | |||| |||| | Sbjct 2235874 ATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCT 2235815 Query 38067 GGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGC 38126 || ||| ||| || || || ||||| | | | | ||| |||| || || || Sbjct 2235814 GGCTCTGATTTCCTCTTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGC 2235755 Query 38127 GTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAAT 38186 ||||||||||| | || | | | ||| || || | || | ||| || |||| || Sbjct 2235754 ATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAAC 2235695 Query 38187 ATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTT 38246 ||| | | | ||||| || | | ||| | ||| || | ||||| || || | ||||| Sbjct 2235694 ATAACGAGCGGTGTTGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTT 2235635 Query 38247 TATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACC 38306 |||| | || || | || | || || |||||| || ||| || |||||||| Sbjct 2235634 AGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACC 2235575 Query 38307 TGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTC 38366 ||| ||| || |||||||| |||| || || |||||| | |||||||| || ||| Sbjct 2235574 AGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTC 2235515 Query 38367 ATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAA 38426 |||| || | | || ||||| |||||||| || || || || |||||||| Sbjct 2235514 ATCCCGCATGGCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAA 2235455 Query 38427 TAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTATT 38484 | |||||||| || || |||| || ||| ||| |||| || || ||||| || Sbjct 2235454 CAGAGTAGGAGAGGCGTGAGTGAA--ATACTTCTGACTCATAAAGTTGTAGGTTTCAATA 2235397 Query 38485 ACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGT 38544 || | || ||| | || |||||||| | || || | ||| | | ||||| || Sbjct 2235396 ACCCTTGCAATGTCATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGA 2235337 Query 38545 CTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCA 38604 | |||| | || ||| | | || || || ||| |||| || || || | |||| Sbjct 2235336 CGTTCTGCAACATTGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCA 2235277 Query 38605 AAATAACTATA-TGAATAATCTCTATCGTA 38633 || ||| |||| |||| ||||||||||||| Sbjct 2235276 AAGTAATTATACTGAA-AATCTCTATCGTA 2235248 >seq2 Length=2687137 Score = 150 bits (166), Expect = 2e-31 Identities = 570/886 (64%), Gaps = 20/886 (2%) Strand=Plus/Plus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 |||||| || ||| ||||| |||||| || || |||||||| | | || || | Sbjct 442715 CTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTT 442774 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 |||||| || ||| ||||| || ||| | ||||||| || | || | Sbjct 442775 CTCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAG 442834 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517 || |||||| || ||||| || | |||||| |||| || | || ||||| || | | Sbjct 442835 TAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAA 442894 Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT 11577 || |||| |||| |||| || | ||||| || | || || || | || || Sbjct 442895 GGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAAT 442954 Query 11578 CGACGTTATAAC---TTCCTTAGATGGTG-GATGTAATAAATGTTTAAACATTAAACACG 11633 | || ||| ||||| | | | | ||| || || || | || || | Sbjct 442955 CT---TTTCAACGATTTCCTCACTGGCTCTGTTGTTC-AAGTGAGAGAATAGCAAGCAAG 443010 Query 11634 CAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGG 11693 |||| || ||||| ||||| ||||| | || || ||||| || || || || || | Sbjct 443011 CAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTG 443070 Query 11694 GCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTC 11753 |||| | |||| ||||| | ||| || |||| ||| || || || |||||||| || | Sbjct 443071 GCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATAC 443130 Query 11754 CCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTGTTGCTAGATATCC 11810 | || ||||| || || || || | | ||| | | | | | || | |||| Sbjct 443131 CTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCC 443190 Query 11811 ATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATA 11870 || | ||||||| ||||| || | ||| | ||| || || || || || || || | Sbjct 443191 ATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACA 443250 Query 11871 AATGCATTTT--TTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTC 11928 | | ||| |||| | |||| | | || ||||| || || || || |||| Sbjct 443251 A--GAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTC 443308 Query 11929 TGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTG 11988 || || || || ||||| |||||||| || || |||||| ||| || | | || Sbjct 443309 GGAGTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTG 443368 Query 11989 TACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAA 12048 || || | || ||||| | ||||| ||||| |||||||||||| | ||||| Sbjct 443369 AACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAA 443428 Query 12049 AAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TTATCCCAAT 12104 ||| || || | ||||| || || || | | | ||| || |||| ||| | Sbjct 443429 AAAGGCAAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGT 443487 Query 12105 CATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTT 12164 ||| ||||| ||| || |||| ||| || | |||||||| || | | |||| Sbjct 443488 CATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTT 443547 Query 12165 TATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210 | ||||||| |||||| || ||||| || | |||||| | |||||| Sbjct 443548 TGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524735577840