Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 232 6e-56
seq2 150 2e-31
>seq1
Length=3325186
Score = 232 bits (256), Expect = 6e-56
Identities = 1163/1830 (64%), Gaps = 47/1830 (3%)
Strand=Plus/Minus
Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894
|| ||||| ||||| |||| || |||| || || || ||||| ||||||| |||
Sbjct 2237061 TAGTACATACCAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTA 2237002
Query 36895 GCGTATGTAGGATT-ATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACC 36953
| || ||| ||| | | || ||| || ||| ||| || ||| | ||
Sbjct 2237001 CCCATAGTTGGAGACATC-AGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGA 2236943
Query 36954 TCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013
|||||| || ||||| || | ||| |||||||||||||||||||| || ||||| |
Sbjct 2236942 TCTGTCCGCAGCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAG 2236883
Query 37014 TTGTTTTATATTATCTGGTAAATCT-----AAATGTTGAATAGAACCATTATGTAACACA 37068
||| | | || || ||| | |||| |||||| || || || | | | |
Sbjct 2236882 GCCTTTGAGTTGCTCAGG--AATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATG 2236825
Query 37069 ATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGT 37128
|| ||| || |||| || | ||| | | | | ||| || | ||||| ||
Sbjct 2236824 ATATGATTTTTCATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAA 2236765
Query 37129 GGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATAT 37188
||||| |||| || || ||||||| |||||| | | || || || || ||||||
Sbjct 2236764 GGATTAACAATTTGGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAA 2236705
Query 37189 GGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCT 37248
||||| | |||| || | || || || || || || || ||||||||||| |||||
Sbjct 2236704 GGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCA 2236645
Query 37249 ATTAGAAGGCTATTTCTCAATCCATGT-GTATTAATTCTCTTTTTTAGTTCATTCCAATC 37307
| |||||| ||||| | || ||| | | |||| | ||| ||| | ||| ||
Sbjct 2236644 ACTAGAAGCGAGTTTCTAAGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTC 2236586
Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367
||| | || | || || || ||||| |||||| || | |||||| | | |||||
Sbjct 2236585 CCACAGCTCAGAGGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGG 2236526
Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAG 37427
|||| | | | | || || |||| ||| | |||| ||||| | ||| |
Sbjct 2236525 AGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAA 2236466
Query 37428 TGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATC 37487
|| ||| || || ||||||||||| || ||||| | | || || ||| |||
Sbjct 2236465 GGCTCCATGGTAGATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATC 2236406
Query 37488 GAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547
|||| | ||| || || ||||||| ||||| |||||||| | | | || ||
Sbjct 2236405 AAATGGGATTCTCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGG 2236346
Query 37548 TCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTAT 37607
||||| | | || ||||| | ||| || || || || || | || || ||
Sbjct 2236345 TCTATTACGCATGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAAT 2236286
Query 37608 TTTATTTAGATTTTTAACTAGT----ATTTTCGTAATTA--------TTCTCAAC-TTGT 37654
| | || | || || ||| | ||||| || || |||| ||||
Sbjct 2236285 TCTGTTCAAGTT----ACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGT 2236230
Query 37655 -CGAACA-TAAATA-CGTTATTATTAACAAATTTACTCAACGA--AATAGATCCTAGATT 37709
| |||| | | || | | | | |||||| || | || |||||| | | ||
Sbjct 2236229 ACCAACAGTGAGTATCATCGGTTTCAACAAAGG--CTGGAAGAGCAATAGAAGCCAAGTT 2236172
Query 37710 ACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGA 37769
||| |||||| ||| ||| | | | | | | |||||| ||| || ||| ||
Sbjct 2236171 ACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGA 2236112
Query 37770 TCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTAT 37829
| |||| ||||| || | || |||| ||| || ||||||| ||| ||||| | ||
Sbjct 2236111 TTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACAT 2236052
Query 37830 ATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTG-CTT 37888
| || || || |||| | || ||||||| || | | ||| || ||| | | |||
Sbjct 2236051 GAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGCGTACCA-AAGCTTTTGGGCTT 2235993
Query 37889 TAACGATCG--CTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATC 37946
| | | | ||| | ||| || ||||||| | || | || | ||| ||
Sbjct 2235992 TGATGGTTTGTCTTCCACGACCTTCCTT--TTCGTATCTTTCGTACAGTTCTTCAAATTC 2235935
Query 37947 ATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTC 38006
|| || | || ||| | || ||| || | |||| | | || | |||||| |
Sbjct 2235934 ATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCC 2235875
Query 38007 ATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTT 38066
|| | ||| || | || ||| || | |||||| | ||||| || | |||| |||| |
Sbjct 2235874 ATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCT 2235815
Query 38067 GGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGC 38126
|| ||| ||| || || || ||||| | | | | ||| |||| || || ||
Sbjct 2235814 GGCTCTGATTTCCTCTTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGC 2235755
Query 38127 GTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAAT 38186
||||||||||| | || | | | ||| || || | || | ||| || |||| ||
Sbjct 2235754 ATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAAC 2235695
Query 38187 ATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTT 38246
||| | | | ||||| || | | ||| | ||| || | ||||| || || | |||||
Sbjct 2235694 ATAACGAGCGGTGTTGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTT 2235635
Query 38247 TATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACC 38306
|||| | || || | || | || || |||||| || ||| || ||||||||
Sbjct 2235634 AGTACCAGCAATGTAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACC 2235575
Query 38307 TGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTC 38366
||| ||| || |||||||| |||| || || |||||| | |||||||| || |||
Sbjct 2235574 AGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTC 2235515
Query 38367 ATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAA 38426
|||| || | | || ||||| |||||||| || || || || ||||||||
Sbjct 2235514 ATCCCGCATGGCAACTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAA 2235455
Query 38427 TAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAA--TTATATGTTTCTATT 38484
| |||||||| || || |||| || ||| ||| |||| || || ||||| ||
Sbjct 2235454 CAGAGTAGGAGAGGCGTGAGTGAA--ATACTTCTGACTCATAAAGTTGTAGGTTTCAATA 2235397
Query 38485 ACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGT 38544
|| | || ||| | || |||||||| | || || | ||| | | ||||| ||
Sbjct 2235396 ACCCTTGCAATGTCATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGA 2235337
Query 38545 CTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCA 38604
| |||| | || ||| | | || || || ||| |||| || || || | ||||
Sbjct 2235336 CGTTCTGCAACATTGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCA 2235277
Query 38605 AAATAACTATA-TGAATAATCTCTATCGTA 38633
|| ||| |||| |||| |||||||||||||
Sbjct 2235276 AAGTAATTATACTGAA-AATCTCTATCGTA 2235248
>seq2
Length=2687137
Score = 150 bits (166), Expect = 2e-31
Identities = 570/886 (64%), Gaps = 20/886 (2%)
Strand=Plus/Plus
Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397
|||||| || ||| ||||| |||||| || || |||||||| | | || || |
Sbjct 442715 CTTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTT 442774
Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457
|||||| || ||| ||||| || ||| | ||||||| || | || |
Sbjct 442775 CTCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAG 442834
Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517
|| |||||| || ||||| || | |||||| |||| || | || ||||| || | |
Sbjct 442835 TAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAA 442894
Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT 11577
|| |||| |||| |||| || | ||||| || | || || || | || ||
Sbjct 442895 GGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAAT 442954
Query 11578 CGACGTTATAAC---TTCCTTAGATGGTG-GATGTAATAAATGTTTAAACATTAAACACG 11633
| || ||| ||||| | | | | ||| || || || | || || |
Sbjct 442955 CT---TTTCAACGATTTCCTCACTGGCTCTGTTGTTC-AAGTGAGAGAATAGCAAGCAAG 443010
Query 11634 CAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGG 11693
|||| || ||||| ||||| ||||| | || || ||||| || || || || || |
Sbjct 443011 CAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTG 443070
Query 11694 GCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTC 11753
|||| | |||| ||||| | ||| || |||| ||| || || || |||||||| || |
Sbjct 443071 GCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATAC 443130
Query 11754 CCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTGTTGCTAGATATCC 11810
| || ||||| || || || || | | ||| | | | | | || | ||||
Sbjct 443131 CTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCC 443190
Query 11811 ATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATA 11870
|| | ||||||| ||||| || | ||| | ||| || || || || || || || |
Sbjct 443191 ATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACA 443250
Query 11871 AATGCATTTT--TTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTC 11928
| | ||| |||| | |||| | | || ||||| || || || || ||||
Sbjct 443251 A--GAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTC 443308
Query 11929 TGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTG 11988
|| || || || ||||| |||||||| || || |||||| ||| || | | ||
Sbjct 443309 GGAGTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTG 443368
Query 11989 TACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAA 12048
|| || | || ||||| | ||||| ||||| |||||||||||| | |||||
Sbjct 443369 AACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAA 443428
Query 12049 AAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TTATCCCAAT 12104
||| || || | ||||| || || || | | | ||| || |||| ||| |
Sbjct 443429 AAAGGCAAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGT 443487
Query 12105 CATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTT 12164
||| ||||| ||| || |||| ||| || | |||||||| || | | ||||
Sbjct 443488 CATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTT 443547
Query 12165 TATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAA 12210
| ||||||| |||||| || ||||| || | |||||| | ||||||
Sbjct 443548 TGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524735577840
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