Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 327 1e-84 seq2 203 4e-47 >seq1 Length=3325186 Score = 327 bits (362), Expect = 1e-84 Identities = 1327/2079 (64%), Gaps = 49/2079 (2%) Strand=Plus/Minus Query 64828 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 64887 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052 Query 64888 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 64947 | || |||| || |||| || || || ||||| || || | ||| | | | Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 64948 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 65007 || | || || |||| || ||| ||| ||||| ||||| ||||| |||| Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932 Query 65008 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 65067 |||| | ||||| |||||||| | || ||||||| || ||||||| | || | | Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872 Query 65068 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 65124 || |||| ||| | ||| |||||||| || |||| || || ||| || | Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812 Query 65125 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 65184 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 | |||||||||| ||||| | || | ||| || ||| ||||| ||||| | | ||| Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA- 65303 | || | |||||||| || | |||||| ||||| ||||||||||| || | || | | Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633 Query 65304 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 65363 ||||||||||| | | || || |||| || | ||||| | ||| || || || Sbjct 2236632 TTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573 Query 65364 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 65423 || || | |||||| | | || || ||| | | Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513 Query 65424 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 65483 || ||||| | |||||||| | |||| ||| | || || || || || | || Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453 Query 65484 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 65543 || |||||||| |||| |||| || | | || || | ||||||||| | Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTC 2236393 Query 65544 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 65603 || || || || || ||||| ||||||||||||| | | || ||||||| | | | Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333 Query 65604 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 || || | ||| ||||||| || || || || | || |||||| | || | || Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273 Query 65664 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAA-ATCGC--- 65711 | |||| | ||| | | || | ||| || ||| | ||| | | Sbjct 2236272 CGAGTGACCAC--CTTCGTG-ATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTA 2236216 Query 65712 TCATCTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCA 65768 ||||| || ||| | | | || |||| ||| |||| ||||| || || || Sbjct 2236215 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCT 2236156 Query 65769 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 65828 | | | ||| | | |||||| ||||| ||| | || ||| || || Sbjct 2236155 TCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAG 2236096 Query 65829 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 65888 || | || || | || |||||||| ||||||||||| | |||||||||||||| ||| Sbjct 2236095 TTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTT 2236036 Query 65889 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 65948 || |||| | || | || || | ||| | | | || || || | ||||| | Sbjct 2236035 TCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCT 2235980 Query 65949 CTCTT----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 66004 | ||| |||||||| | |||| | ||| || || || || | || | Sbjct 2235979 TCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920 Query 66005 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 66064 | | | |||||| ||| ||| | | || | ||| || || | | | || | Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860 Query 66065 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTC 66124 |||||| || |||||||| ||||| ||||| |||| |||||||| ||| |||||| Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800 Query 66125 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAA 66184 ||||| ||||| || || | || || | || || |||||| |||||||| Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740 Query 66185 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 66244 ||| | || | | ||||| || ||||| || || ||||| | || | ||||||||| Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680 Query 66245 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATA 66304 || ||||||||| ||||||||||||||| || || ||||| || || || | || || Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620 Query 66305 GCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 66364 | ||| | |||||||||||| ||| | ||| ||||| || || |||| || || Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560 Query 66365 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 66424 ||| || ||| || || |||||||| || || || || |||||| |||| || Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500 Query 66425 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 66484 || ||||| |||||||| | || || || || ||||| | |||||||| || Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440 Query 66485 GTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 66540 ||| || || | || ||| |||| ||||| || |||||| | | || | Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAG----TTGTAGGTTTCAATAACCCTTGCAATGT 2235384 Query 66541 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 66600 | |||||| || | ||||||||||| | | ||| ||||| | ||| | | | Sbjct 2235383 CATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACAT 2235324 Query 66601 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 66659 || || ||| ||| | ||| ||| ||||||| || || || ||||| || || || | Sbjct 2235323 TGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACT 2235264 Query 66660 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 66719 ||||| |||| ||||| | |||| | ||||| || | ||| | ||| | ||| | Sbjct 2235263 GAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAA-- 2235207 Query 66720 TCCATGGTAA---TACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 66775 | |||| | || |||| | ||||| || ||||| || || || |||| || Sbjct 2235206 --TGTTGTAAGTGTCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTA 2235149 Query 66776 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 66835 | | || || | |||| | | || | || | || | |||||||| ||| || Sbjct 2235148 TTCATACAACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGA 2235089 Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 || || ||||| || || | |||||||||||| ||||| Sbjct 2235088 AACAGCAATTCTTGCTGCCAAAATGGCATAATCGGGATG 2235050 >seq2 Length=2687137 Score = 203 bits (224), Expect = 4e-47 Identities = 584/893 (65%), Gaps = 8/893 (1%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||| || | |||||||| || || || ||||| | || || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||||||||| ||||||||| | || || || | |||||| |||| | | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 | |||||| || || || || | ||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106 ||| |||||||| | || | || || |||||| ||| || ||||| ||||| Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955 Query 36107 GATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 36166 | || |||| ||||| | | | || || || | ||| || || || Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015 Query 36167 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 36226 ||| ||||| || || ||||| | ||| | || ||||| || || | || ||||| Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075 Query 36227 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 36286 || || | |||||| | ||| || || || || || || || |||||||| || ||||| Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135 Query 36287 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCA-CTT 36342 || || || ||||||| | | || | | ||| ||||| ||||| || Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || | | Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254 Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 36462 | ||| || |||||| | || ||||||||||| | || |||| || || Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314 Query 36463 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 36522 ||||| || || |||||||| ||||| |||||| | || |||| || || || || Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374 Query 36523 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582 | | || ||| | ||||||||||| || || || ||| ||| |||||||| || Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434 Query 36583 CAATACATGTTTTATAAAATATTTTTCGTT-TGGT--GTTAGTTTATTCCAATCATTGAT 36639 | || |||||||| || || || | || | | |||||||| |||| | Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGCAA 443494 Query 36640 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 36699 ||| || | || | ||| || | |||||||| || || || |||| ||| ||||| Sbjct 443495 ATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACAT 443554 Query 36700 ATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGATTTT 36752 | ||||||||| ||||||| | || || | ||| || | | || ||||| Sbjct 443555 TTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAAACGACGTTTATTTT 443607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172709501240