Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=2687137 Score = 104 bits (114), Expect = 2e-17 Identities = 272/414 (66%), Gaps = 6/414 (1%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| || ||||||||||| || | ||||| || || || || | || |||||| || Sbjct 443149 GCCTTCGCTGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTG 443090 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || || | || |||||||| ||| | || ||||| ||| | ||| || | || ||| Sbjct 443089 AAAAAGAGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAA 443030 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 || ||||| ||||||||||| |||| || || || |||| | | || || Sbjct 443029 GGATTACACACCGACTTTGCTTGCTTGCTATTCTCTCACTTGAACAACAGAGCCAGTGAG 442970 Query 22930 GA---CGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986 || || || | | || || | || || || || ||||| | | |||| | Sbjct 442969 GAAATCGTTG---AAAAGATTATTACAGAGGCTGTCGAGATTGAAAAAAGATACTTCACA 442913 Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046 || || || || | || || ||||| | | ||| | | ||| | || Sbjct 442912 GATGCTCTTCCTGTTTCCTTGCTGGGAATGAACTGCAGCTTGATGTGCCAGTATGTTGAG 442853 Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAAT 23106 || ||||| ||| | || || | || ||||| | ||| |||| ||||| ||||| Sbjct 442852 TTCGTTGCTGATAGACTACTGGTAGCTCTGGGCAACAAAAAAGTGTACAACGTCACCAAT 442793 Query 23107 CCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 ||||||||||||||||| |||||| | | ||||| || |||||||| ||| Sbjct 442792 CCATTTGATTTCATGGAGAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAA 442739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233552242433