Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 2e-17
>seq2
Length=2687137
Score = 104 bits (114), Expect = 2e-17
Identities = 272/414 (66%), Gaps = 6/414 (1%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
||||| || ||||||||||| || | ||||| || || || || | || |||||| ||
Sbjct 443149 GCCTTCGCTGCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTG 443090
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
|| || | || |||||||| ||| | || ||||| ||| | ||| || | || |||
Sbjct 443089 AAAAAGAGAGGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAA 443030
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929
|| ||||| ||||||||||| |||| || || || |||| | | || ||
Sbjct 443029 GGATTACACACCGACTTTGCTTGCTTGCTATTCTCTCACTTGAACAACAGAGCCAGTGAG 442970
Query 22930 GA---CGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986
|| || || | | || || | || || || || ||||| | | |||| |
Sbjct 442969 GAAATCGTTG---AAAAGATTATTACAGAGGCTGTCGAGATTGAAAAAAGATACTTCACA 442913
Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046
|| || || || | || || ||||| | | ||| | | ||| | ||
Sbjct 442912 GATGCTCTTCCTGTTTCCTTGCTGGGAATGAACTGCAGCTTGATGTGCCAGTATGTTGAG 442853
Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAAT 23106
|| ||||| ||| | || || | || ||||| | ||| |||| ||||| |||||
Sbjct 442852 TTCGTTGCTGATAGACTACTGGTAGCTCTGGGCAACAAAAAAGTGTACAACGTCACCAAT 442793
Query 23107 CCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
||||||||||||||||| |||||| | | ||||| || |||||||| |||
Sbjct 442792 CCATTTGATTTCATGGAGAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAA 442739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233552242433
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |