Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 398 1e-105 seq2 217 2e-51 >seq1 Length=3325186 Score = 398 bits (440), Expect = 1e-105 Identities = 1342/2070 (65%), Gaps = 31/2070 (1%) Strand=Plus/Minus Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052 Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826 | || |||| || |||| || ||||| ||||| || || | ||| | | | Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886 || | || || |||| || ||| ||| ||||| ||||| ||||| |||| Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932 Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946 |||| | ||||| |||||||| | || ||||||| || ||||||| | || | | Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872 Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003 || |||| ||| | ||| |||||||| || |||| || || ||| || | Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812 Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063 | | || | ||| | || || | | | | | | |||||||| | || Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | |||||||||| ||||| | || | ||| || ||| ||||| ||||| | | | Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA- 79182 | || | |||||||| || | |||||| || || ||||||||||| || | || | | Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633 Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242 ||||||||||| || | || || |||| || || ||||| ||||| || ||||| Sbjct 2236632 TTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573 Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302 || | ||| | |||||| || | |||||| | | || || ||| | Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513 Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362 ||||| |||| |||||||| |||||||||| | || || || ||||| | || Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453 Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422 || ||||||||||||| |||| || | | || ||| | ||||||||| | Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTC 2236393 Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482 || || || || || ||||| ||||||||||||| | | || ||||||| | | | Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333 Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542 || || | ||| ||||||| || || || || | || |||||| | || | || Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273 Query 79543 C---TGACTATTACTT--TGACCACATCC----TTT---AGTTTGAGAAAATCAAATCGT 79590 | |||| | ||| ||| ||| | ||| |||| | || || || Sbjct 2236272 CGAGTGACCAC--CTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAA--CAGTGAGT 2236217 Query 79591 C-CATCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTC 79646 |||| || ||| | | | || || | ||| |||| ||||| || || || Sbjct 2236216 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTC 2236157 Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706 | | | ||| | | || ||| || |||||| | |||||| || || Sbjct 2236156 TTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAA 2236097 Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766 || | || || | || |||||||| ||||||||||| | ||||| |||||||| || Sbjct 2236096 GTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGT 2236037 Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGT 79825 ||| |||| | || | || || | ||| | | | || || || | | ||| Sbjct 2236036 TTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCC 2235977 Query 79826 ATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGT 79885 | | || || |||||||| | || | | ||| || || || || | || ||| Sbjct 2235976 ACGACCTTCCT-TTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGG 2235918 Query 79886 CTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTT 79945 | | |||||| || ||| | | || | ||| || |||| | | || | || Sbjct 2235917 CAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTT 2235858 Query 79946 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 80005 |||| || |||||||| ||||| ||||| ||||||||||||| ||| ||||| | Sbjct 2235857 TCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTCTT 2235798 Query 80006 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 80065 |||| ||||| || || | || || | || || | |||||| |||||||||| Sbjct 2235797 TTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGT 2235738 Query 80066 ATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 80125 | | || | | || || || ||||| || || ||||| | || | ||||||||| | Sbjct 2235737 ACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGT 2235678 Query 80126 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC 80185 | ||||||||| ||||||||||||||| || || ||||| || || || | || ||| Sbjct 2235677 TGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGG 2235618 Query 80186 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 80245 ||| |||||||||||||| ||| | ||| ||||| || || |||| || |||| Sbjct 2235617 ATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTA 2235558 Query 80246 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305 | || ||| || || |||||||| || || || || ||||| |||| || || Sbjct 2235557 AAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTA 2235498 Query 80306 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 80365 ||||| |||||||| | || || || || ||||| | |||||||| |||| Sbjct 2235497 AGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGT 2235438 Query 80366 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 80425 | || || | || | | || | ||||| || |||||| | | | || || Sbjct 2235437 GAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCAC 2235378 Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485 |||||| || | ||||||||||| | | ||| ||||| | ||| | | ||| || Sbjct 2235377 CATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATTGCCAT 2235318 Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAG 80544 | ||| ||| | ||||||| ||||||| || || || ||||| || || || |||||| Sbjct 2235317 TAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACTGAAAA- 2235259 Query 80545 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 80604 |||| ||||| | |||| | ||||| || | ||| | ||| | ||| | | Sbjct 2235258 TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATGTTGTAA 2235199 Query 80605 GTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 80663 ||| | || |||| | ||||| || ||||| || || || || | || | | || Sbjct 2235198 GTG-TCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTATTCATACAA 2235140 Query 80664 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 80723 || | |||| | | || | || | || | ||||||| ||| || || || || Sbjct 2235139 CTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAAACAGCAAT 2235080 Query 80724 TCTGGCGGCTAAAATGGCATAATCTGGATG 80753 ||| || || |||||||||||||| ||||| Sbjct 2235079 TCTTGCTGCCAAAATGGCATAATCGGGATG 2235050 >seq2 Length=2687137 Score = 217 bits (240), Expect = 2e-51 Identities = 579/879 (66%), Gaps = 8/879 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||| || | |||||||| || || || || || |||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||||||||| |||||||| || || || | |||||| |||| | | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | |||||| || || || || | ||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 ||| |||||||| | || | || || |||||| || || ||||| ||||| Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 | |||| |||| ||||| | | | || || || | ||| || || || Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 ||| ||| | || || ||||| | ||| || || ||||| || || | || ||||| Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 || || | |||||| | ||| || || || || || || || ||||||||||| ||||| Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---GTATCCA-CTT 50144 || || || |||||||| | | || | | || ||||| ||||| || Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 || ||||| || ||||| | ||| | ||| || || || || |||||||| || | | Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254 Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264 | ||| || |||||| | |||||||| ||||| | || |||| || || Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314 Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324 ||||| || || || ||||| ||||| |||||| | || |||| || || || || Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374 Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384 | | || ||| | ||||||||||| || || || ||| ||| |||||||| || Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434 Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTG--GGTGTTA-GTTTATTCCAATCATTGAT 50441 | || ||||||| || || ||| | | || | |||||||| |||| | Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGCAA 443494 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 ||| || | |||| ||| || | |||||||| || || || |||| ||| ||||| Sbjct 443495 ATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACAT 443554 Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | ||||||||| ||||||| | ||||| | ||| || Sbjct 443555 TTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268701238040