Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 398 1e-105
seq2 217 2e-51
>seq1
Length=3325186
Score = 398 bits (440), Expect = 1e-105
Identities = 1342/2070 (65%), Gaps = 31/2070 (1%)
Strand=Plus/Minus
Query 78707 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 78766
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052
Query 78767 CCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCG 78826
| || |||| || |||| || ||||| ||||| || || | ||| | | |
Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992
Query 78827 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 78886
|| | || || |||| || ||| ||| ||||| ||||| ||||| ||||
Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932
Query 78887 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 78946
|||| | ||||| |||||||| | || ||||||| || ||||||| | || | |
Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872
Query 78947 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 79003
|| |||| ||| | ||| |||||||| || |||| || || ||| || |
Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812
Query 79004 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 79063
| | || | ||| | || || | | | | | | |||||||| | ||
Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752
Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123
| |||||||||| ||||| | || | ||| || ||| ||||| ||||| | | |
Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692
Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA- 79182
| || | |||||||| || | |||||| || || ||||||||||| || | || | |
Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633
Query 79183 TTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGAC 79242
||||||||||| || | || || |||| || || ||||| ||||| || |||||
Sbjct 2236632 TTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573
Query 79243 GGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTAT 79302
|| | ||| | |||||| || | |||||| | | || || ||| |
Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513
Query 79303 GTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAA 79362
||||| |||| |||||||| |||||||||| | || || || ||||| | ||
Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453
Query 79363 ATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT 79422
|| ||||||||||||| |||| || | | || ||| | ||||||||| |
Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTC 2236393
Query 79423 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 79482
|| || || || || ||||| ||||||||||||| | | || ||||||| | | |
Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333
Query 79483 TTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTC 79542
|| || | ||| ||||||| || || || || | || |||||| | || | ||
Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273
Query 79543 C---TGACTATTACTT--TGACCACATCC----TTT---AGTTTGAGAAAATCAAATCGT 79590
| |||| | ||| ||| ||| | ||| |||| | || || ||
Sbjct 2236272 CGAGTGACCAC--CTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAA--CAGTGAGT 2236217
Query 79591 C-CATCTATTACAAACATG--TTCAAC-GCGACAGATGCCAGATTACAAACGGCTACCTC 79646
|||| || ||| | | | || || | ||| |||| ||||| || || ||
Sbjct 2236216 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTC 2236157
Query 79647 ATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAA 79706
| | | ||| | | || ||| || |||||| | |||||| || ||
Sbjct 2236156 TTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAA 2236097
Query 79707 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGT 79766
|| | || || | || |||||||| ||||||||||| | ||||| |||||||| ||
Sbjct 2236096 GTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGT 2236037
Query 79767 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATA-GACTTGT 79825
||| |||| | || | || || | ||| | | | || || || | | |||
Sbjct 2236036 TTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCC 2235977
Query 79826 ATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGT 79885
| | || || |||||||| | || | | ||| || || || || | || |||
Sbjct 2235976 ACGACCTTCCT-TTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGG 2235918
Query 79886 CTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTT 79945
| | |||||| || ||| | | || | ||| || |||| | | || | ||
Sbjct 2235917 CAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTT 2235858
Query 79946 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGT 80005
|||| || |||||||| ||||| ||||| ||||||||||||| ||| ||||| |
Sbjct 2235857 TCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTCTT 2235798
Query 80006 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 80065
|||| ||||| || || | || || | || || | |||||| ||||||||||
Sbjct 2235797 TTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGT 2235738
Query 80066 ATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 80125
| | || | | || || || ||||| || || ||||| | || | ||||||||| |
Sbjct 2235737 ACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGT 2235678
Query 80126 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC 80185
| ||||||||| ||||||||||||||| || || ||||| || || || | || |||
Sbjct 2235677 TGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGG 2235618
Query 80186 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 80245
||| |||||||||||||| ||| | ||| ||||| || || |||| || ||||
Sbjct 2235617 ATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTA 2235558
Query 80246 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305
| || ||| || || |||||||| || || || || ||||| |||| || ||
Sbjct 2235557 AAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTA 2235498
Query 80306 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 80365
||||| |||||||| | || || || || ||||| | |||||||| ||||
Sbjct 2235497 AGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGT 2235438
Query 80366 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 80425
| || || | || | | || | ||||| || |||||| | | | || ||
Sbjct 2235437 GAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCAC 2235378
Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485
|||||| || | ||||||||||| | | ||| ||||| | ||| | | ||| ||
Sbjct 2235377 CATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATTGCCAT 2235318
Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAAG 80544
| ||| ||| | ||||||| ||||||| || || || ||||| || || || ||||||
Sbjct 2235317 TAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACTGAAAA- 2235259
Query 80545 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 80604
|||| ||||| | |||| | ||||| || | ||| | ||| | ||| | |
Sbjct 2235258 TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATGTTGTAA 2235199
Query 80605 GTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 80663
||| | || |||| | ||||| || ||||| || || || || | || | | ||
Sbjct 2235198 GTG-TCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTATTCATACAA 2235140
Query 80664 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 80723
|| | |||| | | || | || | || | ||||||| ||| || || || ||
Sbjct 2235139 CTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAAACAGCAAT 2235080
Query 80724 TCTGGCGGCTAAAATGGCATAATCTGGATG 80753
||| || || |||||||||||||| |||||
Sbjct 2235079 TCTTGCTGCCAAAATGGCATAATCGGGATG 2235050
>seq2
Length=2687137
Score = 217 bits (240), Expect = 2e-51
Identities = 579/879 (66%), Gaps = 8/879 (1%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|||||||| ||| || | |||||||| || || || || || |||| || || ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788
|||||||||||||| |||||||| || || || | |||||| |||| | |
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835
Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848
| |||||| || || || || | ||| ||||| || |||||||| | |
Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895
Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908
||| |||||||| | || | || || |||||| || || ||||| |||||
Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955
Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968
| |||| |||| ||||| | | | || || || | ||| || || ||
Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015
Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028
||| ||| | || || ||||| | ||| || || ||||| || || | || |||||
Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075
Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088
|| || | |||||| | ||| || || || || || || || ||||||||||| |||||
Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135
Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCAT---GTATCCA-CTT 50144
|| || || |||||||| | | || | | || ||||| ||||| ||
Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195
Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204
|| ||||| || ||||| | ||| | ||| || || || || |||||||| || | |
Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254
Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264
| ||| || |||||| | |||||||| ||||| | || |||| || ||
Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314
Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324
||||| || || || ||||| ||||| |||||| | || |||| || || || ||
Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374
Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384
| | || ||| | ||||||||||| || || || ||| ||| |||||||| ||
Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434
Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTG--GGTGTTA-GTTTATTCCAATCATTGAT 50441
| || ||||||| || || ||| | | || | |||||||| |||| |
Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGCAA 443494
Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501
||| || | |||| ||| || | |||||||| || || || |||| ||| |||||
Sbjct 443495 ATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACAT 443554
Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
| ||||||||| ||||||| | ||||| | ||| ||
Sbjct 443555 TTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268701238040
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