Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 363 2e-95 seq2 212 8e-50 >seq1 Length=3325186 Score = 363 bits (402), Expect = 2e-95 Identities = 1332/2071 (64%), Gaps = 33/2071 (2%) Strand=Plus/Minus Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 ||||||| | |||||||||||||| || | || |||| ||||| || |||||||| | Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908 | || |||| || |||| || || || ||||| || || | ||| |||| | Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 | | | | |||||| |||| ||||||| ||| ||||| ||||| ||||| ||| Sbjct 2236991 GAGACATC-AGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCA 2236933 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | ||||| |||||||| | || ||||||| || ||||||| | || | Sbjct 2236932 GCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGT 2236873 Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 | || |||| ||| | ||| |||||||| || |||| ||| || |||||| Sbjct 2236872 TGCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTC 2236813 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | || | ||| | || || | | | | | | ||||||||| | | Sbjct 2236812 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 2236753 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || |||||||||| ||||| | ||| | ||| || ||| ||||| ||||| | || Sbjct 2236752 TGGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACAC 2236693 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 || || | |||||||| || | |||||| ||||| ||||||||||| || | || Sbjct 2236692 TCGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAGAAGCGAG 2236633 Query 71266 TTTCTAAGACCATGT-GATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324 ||||||||||| ||| || || || |||| || || ||||| | ||| || || || Sbjct 2236632 TTTCTAAGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGA 2236574 Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384 || || || | | || || ||| | | Sbjct 2236573 GGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAA 2236514 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 || ||||| | |||||| | |||||| ||| | || || || ||||||| || Sbjct 2236513 GGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTA 2236454 Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 || ||||||||||||| |||| || | | || || || ||||||||| | Sbjct 2236453 GATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCT 2236394 Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564 || || || || || ||||| |||||||| |||| | | || ||||| | | | | Sbjct 2236393 CAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCAT 2236334 Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624 || || | ||| ||||||| || || || || | || |||||| | || | || Sbjct 2236333 GTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTT 2236274 Query 71625 TC---TGACTATTACTT--TGACCACATCC----TTT---AGTTTGAGAAA-ATCAAATC 71671 | |||| | ||| ||| ||| | ||| |||| | || | | | Sbjct 2236273 ACGAGTGACCAC--CTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTA 2236216 Query 71672 TCCCATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCT 71728 || ||| || ||| | | | ||| |||| ||| |||| ||||| || || | Sbjct 2236215 TC--ATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTT 2236158 Query 71729 CATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 71788 | | | | ||| | | ||| ||| ||||| ||| | || ||| || | Sbjct 2236157 CTTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCA 2236098 Query 71789 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAG 71848 | || | || || | || |||||||| ||||||||||| | || || |||||||| | Sbjct 2236097 AGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGG 2236038 Query 71849 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTG 71907 |||| |||| | || | || || | ||| | | | || || || | | |||| Sbjct 2236037 TTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTC 2235978 Query 71908 TATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTG 71967 | | || || |||||||| | || | | ||| || || || || | | | | Sbjct 2235977 CACGACCTTCCT-TTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCG 2235919 Query 71968 TCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGT 72027 | | |||||| ||| | ||| | | || | ||| || |||| | | || | | Sbjct 2235918 GCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTT 2235859 Query 72028 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 72087 ||||| || |||||||| ||||| ||||| ||||||||||||| ||| ||||| Sbjct 2235858 TTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTCT 2235799 Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147 ||||| ||||| || || | || || | || || | |||||| ||||||||| Sbjct 2235798 TTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAG 2235739 Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207 || | || | | || || || ||||| || || ||||| | || | ||||||||| Sbjct 2235738 TACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTG 2235679 Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267 || ||||||||| ||||||||||||||| || || | ||| || || || | || ||| Sbjct 2235678 TTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAG 2235619 Query 72268 CTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327 ||| ||||||||||||| ||| | ||| ||||| || || |||| || ||| Sbjct 2235618 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATT 2235559 Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387 || || ||| || || |||||||| || || || || |||||| |||| || | Sbjct 2235558 AAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACT 2235499 Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 | ||||| |||||||| | || || || || ||||| | |||||||| ||| Sbjct 2235498 AAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCG 2235439 Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507 || || || | || | | || | ||||| || |||||| | | | || || Sbjct 2235438 TGAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCA 2235379 Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567 ||| || || | ||||||||||| | | || ||||| | ||| | | ||| | Sbjct 2235378 CCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATTGCCA 2235319 Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAA 72626 || ||| ||| | ||| ||| ||||||| || || || ||||| || || || |||||| Sbjct 2235318 TTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACTGAAAA 2235259 Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCAT 72686 |||| ||||| | |||| | || || || | ||| | ||| | ||| || | Sbjct 2235258 -TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATGTTGTA 2235200 Query 72687 GGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATA 72745 ||| | || |||| | ||||| || ||||| || || || || | || | | | Sbjct 2235199 AGTG-TCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTATTCATACA 2235141 Query 72746 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTA 72805 | || | |||| | | || | || | || | ||||||| ||| || || || | Sbjct 2235140 ACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAAACAGCAA 2235081 Query 72806 TTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 |||| || || | |||||||||||| ||||| Sbjct 2235080 TTCTTGCTGCCAAAATGGCATAATCGGGATG 2235050 >seq2 Length=2687137 Score = 212 bits (234), Expect = 8e-50 Identities = 578/880 (66%), Gaps = 10/880 (1%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| ||| || | |||||||| || || ||||| || |||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||||||||| |||||||| || || || | |||||| |||| | | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | |||||| || | ||| || | ||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 ||| |||||||| | || | || || |||||| ||| || ||||| ||||| Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955 Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 | || |||| ||||| | | | || || || | ||| || || || Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 ||| ||| | || |||||||| | ||| | || ||||| || || | || ||||| Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 || || | |||||| | ||| || ||||| || || || || ||||||||||| ||||| Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-CTT 42249 || || || ||||||| | | || | | ||| ||||| ||||| || Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 || ||||| || ||||| | ||| | ||| || || || || |||||||| || | | Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | ||| || |||||| | || ||||| ||||| | || |||| || || Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 ||||| || || || ||||| ||||| |||||| | || |||| || || || || Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 | | || ||| | |||||||| || || || || ||| ||| |||||||| || Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434 Query 42490 CAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATCATTGA 42545 | || |||||||| || || | | ||| || |||||||| |||| | Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGTCATGCA 443493 Query 42546 TATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACA 42605 ||| || | |||| ||| || | |||||||| || ||||| |||| ||| |||| Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553 Query 42606 TATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | | |||||| || ||||||| | ||||| | ||| || Sbjct 443554 TTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139107718360