Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1 363 2e-95
seq2 212 8e-50
>seq1
Length=3325186
Score = 363 bits (402), Expect = 2e-95
Identities = 1332/2071 (64%), Gaps = 33/2071 (2%)
Strand=Plus/Minus
Query 70790 CCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849
||||||| | |||||||||||||| || | || |||| ||||| || |||||||| |
Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052
Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTA 70908
| || |||| || |||| || || || ||||| || || | ||| |||| |
Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
| | | | |||||| |||| ||||||| ||| ||||| ||||| ||||| |||
Sbjct 2236991 GAGACATC-AGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCA 2236933
Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028
||||| | ||||| |||||||| | || ||||||| || ||||||| | || |
Sbjct 2236932 GCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGT 2236873
Query 71029 TCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085
| || |||| ||| | ||| |||||||| || |||| ||| || ||||||
Sbjct 2236872 TGCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTC 2236813
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| | || | ||| | || || | | | | | | ||||||||| | |
Sbjct 2236812 ATGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATT 2236753
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
|| |||||||||| ||||| | ||| | ||| || ||| ||||| ||||| | ||
Sbjct 2236752 TGGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACAC 2236693
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265
|| || | |||||||| || | |||||| ||||| ||||||||||| || | ||
Sbjct 2236692 TCGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAGAAGCGAG 2236633
Query 71266 TTTCTAAGACCATGT-GATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324
||||||||||| ||| || || || |||| || || ||||| | ||| || || ||
Sbjct 2236632 TTTCTAAGACC-TGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGA 2236574
Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384
|| || || | | || || ||| | |
Sbjct 2236573 GGGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAA 2236514
Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444
|| ||||| | |||||| | |||||| ||| | || || || ||||||| ||
Sbjct 2236513 GGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTA 2236454
Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504
|| ||||||||||||| |||| || | | || || || ||||||||| |
Sbjct 2236453 GATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCT 2236394
Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564
|| || || || || ||||| |||||||| |||| | | || ||||| | | | |
Sbjct 2236393 CAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCAT 2236334
Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624
|| || | ||| ||||||| || || || || | || |||||| | || | ||
Sbjct 2236333 GTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTT 2236274
Query 71625 TC---TGACTATTACTT--TGACCACATCC----TTT---AGTTTGAGAAA-ATCAAATC 71671
| |||| | ||| ||| ||| | ||| |||| | || | | |
Sbjct 2236273 ACGAGTGACCAC--CTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTA 2236216
Query 71672 TCCCATCTATTACAAACACG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCT 71728
|| ||| || ||| | | | ||| |||| ||| |||| ||||| || || |
Sbjct 2236215 TC--ATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTT 2236158
Query 71729 CATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 71788
| | | | ||| | | ||| ||| ||||| ||| | || ||| || |
Sbjct 2236157 CTTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCA 2236098
Query 71789 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAG 71848
| || | || || | || |||||||| ||||||||||| | || || |||||||| |
Sbjct 2236097 AGTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGG 2236038
Query 71849 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTG 71907
|||| |||| | || | || || | ||| | | | || || || | | ||||
Sbjct 2236037 TTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTC 2235978
Query 71908 TATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTG 71967
| | || || |||||||| | || | | ||| || || || || | | | |
Sbjct 2235977 CACGACCTTCCT-TTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCG 2235919
Query 71968 TCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGT 72027
| | |||||| ||| | ||| | | || | ||| || |||| | | || | |
Sbjct 2235918 GCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTT 2235859
Query 72028 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 72087
||||| || |||||||| ||||| ||||| ||||||||||||| ||| |||||
Sbjct 2235858 TTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTCT 2235799
Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147
||||| ||||| || || | || || | || || | |||||| |||||||||
Sbjct 2235798 TTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAG 2235739
Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207
|| | || | | || || || ||||| || || ||||| | || | |||||||||
Sbjct 2235738 TACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTG 2235679
Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267
|| ||||||||| ||||||||||||||| || || | ||| || || || | || |||
Sbjct 2235678 TTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAG 2235619
Query 72268 CTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327
||| ||||||||||||| ||| | ||| ||||| || || |||| || |||
Sbjct 2235618 GATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATT 2235559
Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387
|| || ||| || || |||||||| || || || || |||||| |||| || |
Sbjct 2235558 AAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACT 2235499
Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447
| ||||| |||||||| | || || || || ||||| | |||||||| |||
Sbjct 2235498 AAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCG 2235439
Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCAT 72507
|| || || | || | | || | ||||| || |||||| | | | || ||
Sbjct 2235438 TGAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCA 2235379
Query 72508 TGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTA 72567
||| || || | ||||||||||| | | || ||||| | ||| | | ||| |
Sbjct 2235378 CCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATTGCCA 2235319
Query 72568 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-TGAAAA 72626
|| ||| ||| | ||| ||| ||||||| || || || ||||| || || || ||||||
Sbjct 2235318 TTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACTGAAAA 2235259
Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCAT 72686
|||| ||||| | |||| | || || || | ||| | ||| | ||| || |
Sbjct 2235258 -TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATGTTGTA 2235200
Query 72687 GGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATA 72745
||| | || |||| | ||||| || ||||| || || || || | || | | |
Sbjct 2235199 AGTG-TCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTATTCATACA 2235141
Query 72746 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTA 72805
| || | |||| | | || | || | || | ||||||| ||| || || || |
Sbjct 2235140 ACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAAACAGCAA 2235081
Query 72806 TTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|||| || || | |||||||||||| |||||
Sbjct 2235080 TTCTTGCTGCCAAAATGGCATAATCGGGATG 2235050
>seq2
Length=2687137
Score = 212 bits (234), Expect = 8e-50
Identities = 578/880 (66%), Gaps = 10/880 (1%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| ||| || | |||||||| || || ||||| || |||| || || ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
|||||||||||||| |||||||| || || || | |||||| |||| | |
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835
Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953
| |||||| || | ||| || | ||| ||||| || |||||||| | |
Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895
Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013
||| |||||||| | || | || || |||||| ||| || ||||| |||||
Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955
Query 42014 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073
| || |||| ||||| | | | || || || | ||| || || ||
Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015
Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133
||| ||| | || |||||||| | ||| | || ||||| || || | || |||||
Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075
Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193
|| || | |||||| | ||| || ||||| || || || || ||||||||||| |||||
Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135
Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT---GTATCCA-CTT 42249
|| || || ||||||| | | || | | ||| ||||| ||||| ||
Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195
Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309
|| ||||| || ||||| | ||| | ||| || || || || |||||||| || | |
Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254
Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369
| ||| || |||||| | || ||||| ||||| | || |||| || ||
Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314
Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429
||||| || || || ||||| ||||| |||||| | || |||| || || || ||
Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374
Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489
| | || ||| | |||||||| || || || || ||| ||| |||||||| ||
Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434
Query 42490 CAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT----TTATTCCAATCATTGA 42545
| || |||||||| || || | | ||| || |||||||| |||| |
Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGTCATGCA 443493
Query 42546 TATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACA 42605
||| || | |||| ||| || | |||||||| || ||||| |||| ||| ||||
Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553
Query 42606 TATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
| | |||||| || ||||||| | ||||| | ||| ||
Sbjct 443554 TTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139107718360
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