Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 3e-16
>seq4
Length=1577441
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
|||||||| |||| || ||||| ||||| ||||| || || | || || ||||
Sbjct 1239722 AAAACTAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGAGTTCTGCCGTCT 1239781
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | ||| ||||| ||| |||| | |||||||||||| ||||| || ||||| |||||
Sbjct 1239782 TCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCC 1239841
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
||| || || | | || | ||||| | | || || || | || | |||
Sbjct 1239842 TGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACCTCGAGGGTAATAGTC 1239901
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||||||| || || || ||||| |||||||||
Sbjct 1239902 TTGCCGGTTAAGGTCTTGACGAAGATTTGCATA 1239934
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | || || || |||| || ||||| ||||| ||||| || ||
Sbjct 1239935 CCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAA 1239994
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| | ||| ||||| ||| |||| | |||||||||||| |||||
Sbjct 1239995 AGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGA 1240054
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | || ||
Sbjct 1240055 ATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACC 1240114
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||||||||| || || || ||||| |||||||||
Sbjct 1240115 TCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCATA 1240162
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | || || || |||| || ||||| ||||| ||||| || ||
Sbjct 1240163 CCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAA 1240222
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| | ||| ||||| ||| |||| | |||||||||||| |||||
Sbjct 1240223 AGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGA 1240282
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | || ||
Sbjct 1240283 ATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACC 1240342
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | || | ||||||||||| || || || ||||| |||||||||
Sbjct 1240343 TCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCATA 1240390
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| |||| ||| | || || || |||| || ||||| ||||| ||||| || ||
Sbjct 1240391 CCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAA 1240450
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || |||||| | ||| ||||| ||| |||| | |||||||||||| |||||
Sbjct 1240451 AGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGA 1240510
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | | || ||
Sbjct 1240511 ATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACC 1240570
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| ||| | ||||| || || | ||||| || || || |||||
Sbjct 1240571 TCAAGAGTGATAGTCTTACCTGTTAGGGTTTTCACAAAAATCTGCAT 1240617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014330285520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |