Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 3e-20
>seq4
Length=1577441
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952
||| || ||||||||||| || || || || ||| || |||||||| ||||| || |
Sbjct 1239706 ACCACCCCTCAATCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGA 1239765
Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
| | || | || |||||||| || |||||||| || || |||||||| || |||
Sbjct 1239766 AAGAGTTCTGC-CGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAG 1239824
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | |||||| || || ||| || ||||| | ||| || |||| | |||||
Sbjct 1239825 GAATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCA 1239884
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| |||| ||||| || || |||||||| ||||| || || ||||||||
Sbjct 1239885 CCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 1239933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777552437628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |