Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 149 1e-31
seq2 136 6e-28
>seq3
Length=1828518
Score = 149 bits (164), Expect = 1e-31
Identities = 197/268 (74%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| |||| |||| ||||||||||| ||||| |||||||||||
Sbjct 1748970 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATCCAAGGTATCACAAAGCCAGCTAT 1749028
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| || || ||| | || | | ||||||| ||| |
Sbjct 1749029 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAACGTATTTCCGCTCTAATCTATGAGGAGGT 1749088
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCG 16610
||| | ||||||||||| ||| | | | ||| ||| |||||| || || || || |
Sbjct 1749089 TCGAGCTGTTTTGAAGACTTTCTTGGAAAACGTGATCAGAGATGCTGTTACA-TACACTG 1749147
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || | ||||| || || || ||||| |||||||||| ||||| | ||||
Sbjct 1749148 AGCACGCCAAGAGGAAGACCGTGACATCATTGGATGTCGTCTATGCCTTGAAGAGACAAG 1749207
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
| |||| | |||||||| ||| ||||
Sbjct 1749208 GACGTACTTTGTATGGTTTCGGAGGTTA 1749235
>seq2
Length=2687137
Score = 136 bits (150), Expect = 6e-28
Identities = 192/267 (72%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| |||| |||| ||||| ||||| ||||| |||||||||||
Sbjct 2291318 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTAT 2291260
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | |||| | | ||||| || |||||| | || | ||| |||| ||||| |
Sbjct 2291259 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGT 2291200
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| ||| | ||| |||||| |||||| | || || ||
Sbjct 2291199 CAGAGCTGTGCTGAAGACTTTCTTAGAGAACGTTATTAGAGATGCTGTTACTTACACTGA 2291140
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||| || || | |||||||||||||| ||||| ||||||| || |||| | |||||
Sbjct 2291139 GCATGCCAAGAGAAAGACTGTCACCTCTTTGGATGTCGTCTACGCTCTGAAGAGACAAGG 2291080
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||| | |||||||| ||| ||||
Sbjct 2291079 ACGTACCTTGTATGGTTTCGGAGGTTA 2291053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075189942623
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |