Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 149 1e-31 seq2 136 6e-28 >seq3 Length=1828518 Score = 149 bits (164), Expect = 1e-31 Identities = 197/268 (74%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| |||| |||| ||||||||||| ||||| ||||||||||| Sbjct 1748970 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATCCAAGGTATCACAAAGCCAGCTAT 1749028 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| || || ||| | || | | ||||||| ||| | Sbjct 1749029 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAACGTATTTCCGCTCTAATCTATGAGGAGGT 1749088 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT-TTCCACTATACCG 16610 ||| | ||||||||||| ||| | | | ||| ||| |||||| || || || || | Sbjct 1749089 TCGAGCTGTTTTGAAGACTTTCTTGGAAAACGTGATCAGAGATGCTGTTACA-TACACTG 1749147 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| || || || ||||| |||||||||| ||||| | |||| Sbjct 1749148 AGCACGCCAAGAGGAAGACCGTGACATCATTGGATGTCGTCTATGCCTTGAAGAGACAAG 1749207 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 | |||| | |||||||| ||| |||| Sbjct 1749208 GACGTACTTTGTATGGTTTCGGAGGTTA 1749235 >seq2 Length=2687137 Score = 136 bits (150), Expect = 6e-28 Identities = 192/267 (72%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| |||| |||| ||||| ||||| ||||| ||||||||||| Sbjct 2291318 GCTAAGCGTCACAGAAAGAT-TCTTAGAGACAACATTCAAGGTATCACAAAGCCAGCTAT 2291260 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | |||| | | ||||| || |||||| | || | ||| |||| ||||| | Sbjct 2291259 CAGAAGATTGGCCAGAAGAGGTGGTGTTAAGCGTATTTCCGCTTTGATCTACGAAGAAGT 2291200 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| ||| | ||| |||||| |||||| | || || || Sbjct 2291199 CAGAGCTGTGCTGAAGACTTTCTTAGAGAACGTTATTAGAGATGCTGTTACTTACACTGA 2291140 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || | |||||||||||||| ||||| ||||||| || |||| | ||||| Sbjct 2291139 GCATGCCAAGAGAAAGACTGTCACCTCTTTGGATGTCGTCTACGCTCTGAAGAGACAAGG 2291080 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||| | |||||||| ||| |||| Sbjct 2291079 ACGTACCTTGTATGGTTTCGGAGGTTA 2291053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075189942623