Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 4e-40
>seq2
Length=2687137
Score = 179 bits (198), Expect = 4e-40
Identities = 597/921 (65%), Gaps = 29/921 (3%)
Strand=Plus/Plus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| |||||| |||||| |||||||| || || ||||| || |||| || ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 21245 TCCATAAAATCAAATGGATTT-TCAGATT-TAAA-TATTTTATTACAACCCAGTTCTGAT 21301
||||| |||||||||||||| | | || || | | |||| || | |||| ||
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGC---CCAGAGCTACC 442832
Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361
| || |||||| || || || || | ||| || ||||| || || ||||| || | |
Sbjct 442833 AGTAGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGC 442892
Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421
|| ||||||||||| | ||| || | |||||| || ||| || || |||
Sbjct 442893 AAGGAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATA 442952
Query 21422 ATATTTATTATCCTAGATGTACTAGGGGGATACAAT----AATTGTTTAAACATCAAACA 21477
|| ||| || ||| | || || | | || || || | ||| ||
Sbjct 442953 ATCTTT----TCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCA 443008
Query 21478 TGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACC 21537
||||| || || || |||||||| || | || | ||||| || || || |||||
Sbjct 443009 AGCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 443068
Query 21538 GGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAAT 21597
||||| | ||||||||||| ||||| || || || || || | || |||||||| ||
Sbjct 443069 TGGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGAT 443128
Query 21598 GCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATAT 21657
|| ||||| ||||| || ||||| || |||||| || | || || | ||| ||
Sbjct 443129 ACCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAAT 443188
Query 21658 CCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717
|||| | ||||| | ||||||||||| ||||| ||| || || || || || ||
Sbjct 443189 CCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAA 443248
Query 21718 -AAGATGAtt-tttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATT 21775
|||| ||| ||| | | ||| | ||| || ||
Sbjct 443249 CAAGA--ATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTT 443306
Query 21776 TCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACAT 21835
|| || || || || || ||| || ||||| |||||||||||| |||| || | | |
Sbjct 443307 TCGGAGTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGT 443366
Query 21836 TGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCA 21895
|||||||| | || || |||| |||||||| || || |||||| ||| |||
Sbjct 443367 TGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCA 443426
Query 21896 AAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT----TTTTTCCA 21951
||||| || | | | |||||||| || || || ||| || || |||||
Sbjct 443427 AAAAAGGCAAGAACTCTAGAGATAAAATACTTCTCATTGTC-GTTCATACGATTATTCCA 443485
Query 21952 ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTT 22011
|| ||||| ||| || |||| ||| || | ||||||||| ||| ||||
Sbjct 443486 GTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTG 443545
Query 22012 TTTATACATAATCCAGATATCATTATATATTATTGGAAATATTAC-AAAC--CTGTTATT 22068
||| ||||| |||||| || | |||| | | || || | || |||| | |||||
Sbjct 443546 TTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAAACGACGTTTATT 443605
Query 22069 TGATTCAACTAAAAGTGGTTC 22089
||||||||| ||||| ||
Sbjct 443606 ---TTCAACTAAGAGTGGCTC 443623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900726863640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |