Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 334 9e-87 seq2 235 7e-57 >seq1 Length=3325186 Score = 334 bits (370), Expect = 9e-87 Identities = 1325/2076 (64%), Gaps = 43/2076 (2%) Strand=Plus/Minus Query 61984 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103 | || |||| || |||| || || || ||||| || || | ||| | | | Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163 || | || || |||| || ||| ||| ||||| ||||| ||||| |||| Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932 Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223 |||| | ||||| |||||||| | || ||||||| || ||||||| | || | | Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872 Query 62224 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 || |||| ||| | ||| |||||||| || |||| || || ||| || | Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 | |||||||||| ||||| | || | ||| || ||| ||||| ||||| | ||| Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA- 62459 | || | |||||||| || | |||||| ||||| ||||||||||| || | || | | Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633 Query 62460 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62519 ||||||||||| | | || || |||| || | ||||| | ||| || || || Sbjct 2236632 TTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573 Query 62520 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62579 || || | |||||| | | || || ||| | | Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513 Query 62580 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62639 || ||||| | |||||||| | |||| ||| | || || || || || | || Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453 Query 62640 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 62699 || |||||||| |||| |||| || | | || || | ||||||||| | Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTC 2236393 Query 62700 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62759 || || || || || ||||| ||||||||||||| | | || ||||||| | | | Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333 Query 62760 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62819 || || | ||| ||||||| || || || || | || |||||| | || | || Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273 Query 62820 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC-------- 62868 | |||| | ||| | | || | ||| || ||| | | | | Sbjct 2236272 CGAGTGACCAC--CTTCGTG-ATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTA 2236216 Query 62869 -CATCTATTACAAACATG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 62924 |||| || ||| | | | ||| |||| ||| |||| ||||| || || || Sbjct 2236215 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCT 2236156 Query 62925 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 62984 | | | ||| | | |||||| ||||| ||| | || || || || Sbjct 2236155 TCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAG 2236096 Query 62985 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63044 || | || || | || |||||||| ||||||||||| | |||||||||||||| ||| Sbjct 2236095 TTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTT 2236036 Query 63045 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63104 || |||| | || | || || | ||| | | | || || || | ||||| | Sbjct 2236035 TCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCT 2235980 Query 63105 CTC----CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63160 | | ||| |||||||| | |||| | ||| || || || || | || | Sbjct 2235979 TCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920 Query 63161 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63220 | | | |||||| ||| ||| | | || | ||| || || | | | || | Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860 Query 63221 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63280 |||||| || |||||||| ||||| ||||| ||||||||||||| ||| |||||| Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800 Query 63281 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63340 ||||| ||||| || || | || || | || || | |||||| |||||||| Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740 Query 63341 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63400 ||| | || | | ||||| || ||||| || || ||||| | || | ||||||||| Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680 Query 63401 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460 || ||||||||| |||||||||||||||||| || |||| || ||||| | || || Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620 Query 63461 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63520 | ||| |||||||||||||| ||| | ||| ||||| || || |||| || || Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560 Query 63521 TAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAG 63580 ||| || ||| || || || ||||| ||||| || || ||||| |||| || Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500 Query 63581 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63640 || ||||| |||||||| | || || || || ||||| | |||||||| || Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440 Query 63641 GTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 63696 ||| || || | || ||| |||| ||||| || |||||| | | || | Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAG----TTGTAGGTTTCAATAACCCTTGCAATGT 2235384 Query 63697 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63756 | |||||| || | ||||||||||| | | ||| ||||| | ||| | | | Sbjct 2235383 CATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACAT 2235324 Query 63757 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 63815 || || ||| ||| | ||| ||| ||||||| || || || ||||| || || || | Sbjct 2235323 TGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACT 2235264 Query 63816 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATA 63875 ||||| |||| ||||| | |||| | ||||| || | ||| | ||| | ||| || Sbjct 2235263 GAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATG 2235205 Query 63876 TCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 63934 | ||| | || |||| | ||||| || ||||| || || || || | || | Sbjct 2235204 TTGTAAGTG-TCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTATTC 2235146 Query 63935 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAC 63994 | || || | |||| | | || | || | || | ||||||| ||| || || Sbjct 2235145 ATACAACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAAAC 2235086 Query 63995 GGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 || ||||| || || | |||||||||||| ||||| Sbjct 2235085 AGCAATTCTTGCTGCCAAAATGGCATAATCGGGATG 2235050 >seq2 Length=2687137 Score = 235 bits (260), Expect = 7e-57 Identities = 583/880 (66%), Gaps = 10/880 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||| || | |||||||| || || || || || |||| || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||||||||| |||||||| || || || | |||||| |||| | | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | |||||| || ||||| || | ||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 ||| |||||||| | || | || || |||||| || || ||||| ||||| Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312 | |||| |||| ||||| | | | || || || | ||| || || || Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015 Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372 ||| ||| | || || ||||| | ||| || || ||||| || || | || ||||| Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075 Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432 || || | |||||| | ||| || || |||||||| || || ||||||||||| ||||| Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135 Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-CTT 33488 || ||||| ||||||| | | || | | || ||||| ||||| || Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 || ||||| || ||||| | ||| | ||| || || || || |||||||| || | | Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | ||| || |||||| | |||||||| ||||| | || |||| || || Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 ||||| || || || ||||| ||||| |||||| | || |||| || || || || Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | || |||| ||||||||||||| || || || ||| ||| |||||||| || Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434 Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGA 33784 | || |||||||| || || | || ||| | |||||||| |||| | Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGTCATGCA 443493 Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844 ||| || | |||| ||| || | |||||||| || || || |||| ||| |||| Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553 Query 33845 TGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | | ||||||||| | ||||| | ||||| | ||| || Sbjct 443554 TTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947114344760