Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 334 9e-87
seq2 235 7e-57
>seq1
Length=3325186
Score = 334 bits (370), Expect = 9e-87
Identities = 1325/2076 (64%), Gaps = 43/2076 (2%)
Strand=Plus/Minus
Query 61984 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043
||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| |
Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052
Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103
| || |||| || |||| || || || ||||| || || | ||| | | |
Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992
Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163
|| | || || |||| || ||| ||| ||||| ||||| ||||| ||||
Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932
Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223
|||| | ||||| |||||||| | || ||||||| || ||||||| | || | |
Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872
Query 62224 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280
|| |||| ||| | ||| |||||||| || |||| || || ||| || |
Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812
Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340
| | ||| | ||| | || || | | | | | | |||||||| | ||
Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752
Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400
| |||||||||| ||||| | || | ||| || ||| ||||| ||||| | |||
Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692
Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA- 62459
| || | |||||||| || | |||||| ||||| ||||||||||| || | || | |
Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633
Query 62460 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62519
||||||||||| | | || || |||| || | ||||| | ||| || || ||
Sbjct 2236632 TTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573
Query 62520 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62579
|| || | |||||| | | || || ||| | |
Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513
Query 62580 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62639
|| ||||| | |||||||| | |||| ||| | || || || || || | ||
Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453
Query 62640 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTT 62699
|| |||||||| |||| |||| || | | || || | ||||||||| |
Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTC 2236393
Query 62700 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62759
|| || || || || ||||| ||||||||||||| | | || ||||||| | | |
Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333
Query 62760 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62819
|| || | ||| ||||||| || || || || | || |||||| | || | ||
Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273
Query 62820 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC-------- 62868
| |||| | ||| | | || | ||| || ||| | | | |
Sbjct 2236272 CGAGTGACCAC--CTTCGTG-ATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTA 2236216
Query 62869 -CATCTATTACAAACATG--TTCAAG-GCAACAGATGCCAGATTACAAACGGCTACCTCA 62924
|||| || ||| | | | ||| |||| ||| |||| ||||| || || ||
Sbjct 2236215 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCT 2236156
Query 62925 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 62984
| | | ||| | | |||||| ||||| ||| | || || || ||
Sbjct 2236155 TCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAG 2236096
Query 62985 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63044
|| | || || | || |||||||| ||||||||||| | |||||||||||||| |||
Sbjct 2236095 TTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTT 2236036
Query 63045 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 63104
|| |||| | || | || || | ||| | | | || || || | ||||| |
Sbjct 2236035 TCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCT 2235980
Query 63105 CTC----CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63160
| | ||| |||||||| | |||| | ||| || || || || | || |
Sbjct 2235979 TCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920
Query 63161 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63220
| | | |||||| ||| ||| | | || | ||| || || | | | || |
Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860
Query 63221 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63280
|||||| || |||||||| ||||| ||||| ||||||||||||| ||| ||||||
Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800
Query 63281 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63340
||||| ||||| || || | || || | || || | |||||| ||||||||
Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740
Query 63341 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63400
||| | || | | ||||| || ||||| || || ||||| | || | |||||||||
Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680
Query 63401 ATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATA 63460
|| ||||||||| |||||||||||||||||| || |||| || ||||| | || ||
Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620
Query 63461 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63520
| ||| |||||||||||||| ||| | ||| ||||| || || |||| || ||
Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560
Query 63521 TAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAG 63580
||| || ||| || || || ||||| ||||| || || ||||| |||| ||
Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500
Query 63581 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63640
|| ||||| |||||||| | || || || || ||||| | |||||||| ||
Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440
Query 63641 GTGCGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 63696
||| || || | || ||| |||| ||||| || |||||| | | || |
Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAG----TTGTAGGTTTCAATAACCCTTGCAATGT 2235384
Query 63697 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63756
| |||||| || | ||||||||||| | | ||| ||||| | ||| | | |
Sbjct 2235383 CATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACAT 2235324
Query 63757 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 63815
|| || ||| ||| | ||| ||| ||||||| || || || ||||| || || || |
Sbjct 2235323 TGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACT 2235264
Query 63816 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATA 63875
||||| |||| ||||| | |||| | ||||| || | ||| | ||| | ||| ||
Sbjct 2235263 GAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAATG 2235205
Query 63876 TCCATGGTGATACT-TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTT 63934
| ||| | || |||| | ||||| || ||||| || || || || | || |
Sbjct 2235204 TTGTAAGTG-TCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTATTC 2235146
Query 63935 GAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATAC 63994
| || || | |||| | | || | || | || | ||||||| ||| || ||
Sbjct 2235145 ATACAACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGAAAC 2235086
Query 63995 GGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
|| ||||| || || | |||||||||||| |||||
Sbjct 2235085 AGCAATTCTTGCTGCCAAAATGGCATAATCGGGATG 2235050
>seq2
Length=2687137
Score = 235 bits (260), Expect = 7e-57
Identities = 583/880 (66%), Gaps = 10/880 (1%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| ||| || | |||||||| || || || || || |||| || || ||
Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
|||||||||||||| |||||||| || || || | |||||| |||| | |
Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| |||||| || ||||| || | ||| ||||| || |||||||| | |
Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252
||| |||||||| | || | || || |||||| || || ||||| |||||
Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955
Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312
| |||| |||| ||||| | | | || || || | ||| || || ||
Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015
Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372
||| ||| | || || ||||| | ||| || || ||||| || || | || |||||
Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075
Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432
|| || | |||||| | ||| || || |||||||| || || ||||||||||| |||||
Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135
Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCAT---GTATCCA-CTT 33488
|| ||||| ||||||| | | || | | || ||||| ||||| ||
Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195
Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548
|| ||||| || ||||| | ||| | ||| || || || || |||||||| || | |
Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254
Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608
| ||| || |||||| | |||||||| ||||| | || |||| || ||
Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314
Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668
||||| || || || ||||| ||||| |||||| | || |||| || || || ||
Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374
Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728
| | || |||| ||||||||||||| || || || ||| ||| |||||||| ||
Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434
Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGA 33784
| || |||||||| || || | || ||| | |||||||| |||| |
Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGTCATGCA 443493
Query 33785 TATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33844
||| || | |||| ||| || | |||||||| || || || |||| ||| ||||
Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553
Query 33845 TGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
| | ||||||||| | ||||| | ||||| | ||| ||
Sbjct 443554 TTTGCCAGATGTCGTGATATTTCAAAGGGAAGAGAACGAA 443593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947114344760
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