Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 183 8e-41 seq2 114 3e-20 >seq1 Length=3325186 Score = 183 bits (202), Expect = 8e-41 Identities = 755/1170 (65%), Gaps = 38/1170 (3%) Strand=Plus/Plus Query 363380 AGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGT 363438 ||||| || || |||| ||||| |||| | ||| ||||| ||| | || ||||| Sbjct 2235264 AGTATAATTACTTTGGATTCAAGACCTTGGAAAGATCTTACCT-TCTGAGAATTAATGGC 2235322 Query 363439 GATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCG 363498 || ||| ||||| || || || | | |||||||| ||||| ||||| ||| | Sbjct 2235323 AATGTTGCAGAACGTCCTCAACACTTAATTATGCGTGTCGCTATCGGTATTCATGGTGAT 2235382 Query 363499 GATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATT-CACGCACGC 363557 || ||| | |||||||| || || || | ||| | ||||| ||| ||||| Sbjct 2235383 GACATTGCAAGGGTTATTGAAACCTACAACTTTATGAGT-CAGAAGTATTTCACTCACGC 2235441 Query 363558 CACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC- 363616 | | || || ||| || ||||| || | | | ||||| ||||| || || |||||| Sbjct 2235442 CTCTCCTACTCTGTTTAACGCTGGTACCCCTCACCCACAAATGTCGTCATG-TTTCTTAG 2235500 Query 363617 TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTA 363676 | ||| ||| || || || || ||||| | ||| || | ||| | |||||| | | Sbjct 2235501 TTGCCATGCGGGATGACTCGATTGAAGGTATTTATGATACTTTGAAGGAATGTGCTTTAA 2235560 Query 363677 TTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGT 363735 ||||||| | ||| || ||||||||| | || || ||| ||||||| |||| | | Sbjct 2235561 TTTCCAAAACTGCTGGTGGAATTGGTTTGCACATTCATAATATTCGTGCCACAGGATCCT 2235620 Query 363736 TACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 ||||| || || || |||| |||| || | |||| ||| | | || || | Sbjct 2235621 -ACATTGCTGGTACTAACGG-TACTTCGAACGGTATTATTCCAATGGTGAGAGTTTTCAA 2235678 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 ||| || || | || || || || ||||| |||||| || || |||||| |||| Sbjct 2235679 CAACACCGCTCGTTATGTTGATCAAGGTGGTAACAAGCGCCCTGGTGCATTTGCTTTGTA 2235738 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 | || || ||||| || || || | ||| |||| | || || ||| ||||| Sbjct 2235739 CTTGGAACCATGGCATGCGGACATCTTCGCCTTTATTGACATTCGTAAGAACCATGGAAA 2235798 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||||||| | | || | ||||| ||| || || ||| | |||| | || ||||| Sbjct 2235799 AGAGGAAATCAGAGCCAGAGATCTATTCCCGGCTCTATGGATCCCTGATCTGTTCATGAA 2235858 Query 363975 GCGCGTGGAGGCAGGTAA----GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 | || || ||| || ||| ||| | || || | ||| || ||| || | Sbjct 2235859 AAGGGTCGA-ACAG--AATGGCGAA-TGGACCCTGTTCTCTCCAAGTGAGGCTCCTGGCC 2235914 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090 || |||| || | || || || | || | || ||||||| || ||| | |||| Sbjct 2235915 TTGCCGACGTCTACGGCGATGAATTTGAAGAACTGTACGAAAGATACGAA----AAGGAA 2235970 Query 364091 AGGCTCGTAAGACA----ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 | | | |||||| || || || ||||| |||| |||||| | || | ||| Sbjct 2235971 GGTCGTGGAAGACAAACCATCAAAGCCCAAAAGCTTTGGTACGCCATCCTCGAGGCACAG 2236030 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206 | || || || || || | |||||||| || ||| | || ||| || |||||||| Sbjct 2236031 ACAGAAACCGGTACTCCATTCATGTTGTATAAGGATGCTTGTAACAAGAAAACCAACCAG 2236090 Query 364207 CAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCT 364266 || || | ||| ||| | ||||| ||| |||||| |||| || | | Sbjct 2236091 AAGAACTTGGGTGTCATTAAATCCTCTAACCTTTGTTGTGAGATTGTTGAGTATTCTTCC 2236150 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAA 364323 || || || ||||| || |||||| | || || || || ||||| || ||||| || Sbjct 2236151 CCAGAAGAAACTGCTGTCTGTAACTTGGCTTCTATTGCTCTTCCAGCCTTTGTTGAAACC 2236210 Query 364324 GATGGT----ACTTTTG--ACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACT 364374 |||| | ||| ||| || || | | || ||||| | || | | ||| Sbjct 2236211 GATGATACTCACTGTTGGTACAACTTTGAAAAGCTGCATGACATCACGAAGGTGGTCACT 2236270 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434 | || | ||| ||||||||| || || || || |||| || || | | || Sbjct 2236271 CGTAACTTGAACAGAATTATCGACAGAAACTACTACCCGGTTCCAGAGGCTAGGAGATCC 2236330 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || |||||| || | || |||| | ||||||| || || | ||||| | ||| |||| | Sbjct 2236331 AACATGCGTAATAGACCAATTGCTGTTGGTGTTCAAGGTTTAGCTGATGCTTTCATGAAG 2236390 Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCT 364524 | | || |||||||||| || || ||| Sbjct 2236391 TTGAGAATCCCATTTGATTCTCCAGAGGCT 2236420 >seq2 Length=2687137 Score = 114 bits (126), Expect = 3e-20 Identities = 481/748 (64%), Gaps = 20/748 (3%) Strand=Plus/Minus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 |||| || || |||||| || | || ||||| || ||| ||| | ||| || || Sbjct 443439 TTCTTGCCTTTTTTGCTGCCTCTGATGGTATTGTCAATGAAAATTTGGTGGAAAACTTCA 443380 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 |||| ||||| || || || | |||||| || ||| | ||||| ||||| || | Sbjct 443379 GCGCTGAGGTTCAACTTCCCGAAGCAAAATGTTTTTACGGTTTTCAAATCATGATGGAGA 443320 Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393 | | ||| | ||||| || || || || | | | | | ||||| | | ||| Sbjct 443319 ACATCCACTCCGAAACTTACTCATTGTTGATTGATACTTACATCAAAGATCCAAAAGAAT 443260 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452 |||| ||| ||| || || ||||||| || || || | ||||| || ||| Sbjct 443259 C-CGAATTCTTGTTCAATGCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGG 443201 Query 22453 GCGCTGAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCT 22509 || ||| |||||| | |||| | | || ||||| |||||| | |||| || ||| Sbjct 443200 GCCATGAGATGGATTGCCGATGACGATGCTTTGTTCGCTGAACGTTTGGTTGCCTTCGCT 443141 Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569 | |||||||| || |||||||| || | || | | ||||| ||| | ||||| | Sbjct 443140 GCTGTTGAAGGTATCTTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAGAGA 443081 Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629 | ||||||| ||| | || || || |||||| | ||| || ||||||| || | || Sbjct 443080 GGTCTTATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAAGGATTACAC 443021 Query 22630 ACCGATTTTGCGTGTATGCTATATCGGAATCATATCA-TTCATAAACTT--CCAT--ATG 22684 ||||| ||||| || |||||| || | ||| || | ||| ||| | | Sbjct 443020 ACCGACTTTGCTTGCTTGCTAT-------TC-TCTCACTTGAACAACAGAGCCAGTGAGG 442969 Query 22685 AAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGG 22744 ||| || | ||||||||| | || || || ||||| || | || | Sbjct 442968 AAATCGTTGAAAAGATTATTACAGAGGCTGTCGAGATTGAAAAAAGATACTTCACAGATG 442909 Query 22745 CGTTACCAGTAAGTCTCATTGGTATCAA-TGCCGAATCAATGAGTACATATATTAAATTT 22803 | | || || | | || || || ||| | | | || | ||| || | || Sbjct 442908 CTCTTCCTGTTTCCTTGCTGGGAATGAACTGCAGCTTGA-TGTGCCAGTATGTTGAGTTC 442850 Query 22804 GTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCA 22863 ||||| ||| | ||| | | | || || | ||| || |||||| |||||| Sbjct 442849 GTTGCTGATAGACTACTGGTAGCTCTGGGCAACAAAAAAGTGTACAACGTCACCAATCCA 442790 Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923 ||||| | ||||| ||||| | | || |||||||| ||||||||||| |||||| Sbjct 442789 TTTGATTTCATGGAGAACATTTCTTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTT 442730 Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951 ||| |||||||| |||||||| |||| Sbjct 442729 TCTGATTACCAAAAGGCAGGTGTCATGG 442702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353416308602