Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=1577441 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||||||||| |||||||| ||||| || || || || || || || | || |||||| Sbjct 1240621 AAAAATGCAGATTTTTGTGAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTC 1240562 Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 ||||| ||| |||| || || || ||| || || ||||| | || || Sbjct 1240561 ATCAGACACCATTG-ACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTG 1240503 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 |||||||| | | || | ||| || || ||||| ||||| | || ||| | | || | Sbjct 1240502 ATCAGCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACT 1240443 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||||| || || ||| | || |||| ||||||| |||| || Sbjct 1240442 ATAACATTCAAAAGGAATCCACTCTTCACTTGGTCCTGAGATTAAGAGGTGG 1240391 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || |||||| |||| |||||| Sbjct 1240161 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1240102 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || ||| || || ||||| | || |||||| Sbjct 1240101 GACACCATTG-ACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCA 1240043 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || || ||||| ||||| | || ||| | | || ||||| Sbjct 1240042 GCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAA 1239983 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| || || ||| | || |||| ||||||| |||| || Sbjct 1239982 CATTCAAAAGGAATCCACTCTTCACTTGGTCCTGAGATTAAGAGGTGG 1239935 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || |||||| |||| |||||| Sbjct 1240389 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1240330 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || ||| || || ||||| | || |||||| Sbjct 1240329 GACACCATTG-ACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCA 1240271 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || || ||||| ||||| | || ||| | | || ||||| Sbjct 1240270 GCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAA 1240211 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| || || ||| | || |||| ||||||| |||| || Sbjct 1240210 CATTCAAAAGGAATCCACTCTTCACTTGGTCCTGAGATTAAGAGGTGG 1240163 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || || |||||| |||| |||||| Sbjct 1239933 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1239874 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || || || ||| || || ||||| | || |||||| Sbjct 1239873 GACACCATTG-ACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCA 1239815 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | ||| || || ||||| ||||| | || ||| | | || ||||| Sbjct 1239814 GCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAA 1239755 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACC 115518 ||||||||| || || ||| | || | || || |||||| | || || |||| Sbjct 1239754 CATTCAAAAGGAATCCACTCTTCACTTAGTTTTAAGATTGAGGGGTGGTGAACC 1239701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343942977320