Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 120 2e-22 seq2 118 9e-22 seq4 91.5 1e-13 >seq3 Length=1828518 Score = 120 bits (132), Expect = 2e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || |||| |||| || ||||||||||| ||||||||||| | || ||| | | Sbjct 868950 CTAAGGACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCA 868891 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||||||||| || || ||| | || || ||||||||||| ||| | ||||| ||| Sbjct 868890 TCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTG 868831 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | ||||||| | |||| |||| |||||| Sbjct 868830 TCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATA 868771 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| || || || || ||||| ||||||||| Sbjct 868770 GTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTTG 868732 >seq2 Length=2687137 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 ||||| |||| |||| || |||||||| || ||||||||||||| || ||| | || Sbjct 1169906 CTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCTACCG 1169965 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || |||||||| || || ||| |||| | || |||||||| ||| | || || ||| Sbjct 1169966 TCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTG 1170025 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||| | ||| || | | | | |||||| || ||| ||||| ||| ||| Sbjct 1170026 TCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATG 1170085 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || ||||| | || ||||| |||||||||||||| Sbjct 1170086 GTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 1170123 >seq4 Length=1577441 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || ||||| |||| || || ||||| |||||||| ||||| ||||| | Sbjct 1240391 CCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAA 1240450 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| |||||||| || || ||| | || | || || || || ||| Sbjct 1240451 AGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGA 1240510 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| ||| | ||| || | | | | ||||| | |||| Sbjct 1240511 ATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACC 1240570 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941 || | ||||| || || || || || ||||| ||||||||||||||||| || Sbjct 1240571 TCAAGAGTGATAGTCTTACCTGTTAGGGTTTTCACAAAAATCTGCATTTTTTA 1240623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087945692890