Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 345 5e-90 seq2 196 6e-45 >seq1 Length=3325186 Score = 345 bits (382), Expect = 5e-90 Identities = 1374/2151 (64%), Gaps = 55/2151 (3%) Strand=Plus/Minus Query 61839 CCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 61898 ||||||| | ||| || ||||||| ||| | || | || ||||| || |||||||| | Sbjct 2237111 CCTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAGCTTGAGTACGCAGGTAGTACATAC 2237052 Query 61899 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 61958 | || |||| || |||| || || || ||||| || || | ||| | | | Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 61959 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62018 || | || || |||| || ||| ||| ||||| ||||| ||||| |||| Sbjct 2236991 GAGACATCAGGTGAATGTTCAACGACTGAGATTGGTCGATATAGGCTGATCTGTCCGCAG 2236932 Query 62019 CCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62078 |||| | || || |||||||| | || ||||||| || ||||||| | || | | Sbjct 2236931 CCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTTATAAAGGCCTTTGAGTT 2236872 Query 62079 CTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 || |||| ||| | ||| |||||||| || |||| || || ||| || | Sbjct 2236871 GCTCAGGAATGTTGGGCAAATTTTGAATGGAGCCGTTGTCTGAAATGATATGATTTTTCA 2236812 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195 | | ||| | ||| | || || | | | | | | |||||||| | || Sbjct 2236811 TGTTATCGTCCCAAAGACCCAAATCCACTAGATCACGCAATAAGTAAGGATTAACAATTT 2236752 Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255 | |||||||||| ||||| | || | ||| || ||| ||||| ||||| | | ||| Sbjct 2236751 GGAATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACT 2236692 Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTA- 62314 | || | |||||||| || | |||||| ||||| ||||||||||| || | || | | Sbjct 2236691 CGTTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAG-AAGCGAG 2236633 Query 62315 TTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62374 ||||||||||| | | || || |||| || | ||||| | ||| || || || Sbjct 2236632 TTTCTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTCCCACAGCTCAGAG 2236573 Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATAT 62434 || || | |||||| | | || || ||| | | Sbjct 2236572 GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAG 2236513 Query 62435 GTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAA 62494 || ||||| | |||||||| | |||| ||| | || || || || || | || Sbjct 2236512 GTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATGGTAG 2236453 Query 62495 ATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT 62554 || |||||||| |||| |||| || | | || || | ||||||||| | Sbjct 2236452 ATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTC 2236393 Query 62555 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62614 || || || || || ||||| ||||||||||||| | | || ||||||| | | | Sbjct 2236392 AACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATG 2236333 Query 62615 TTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 62674 || || | ||| ||||||| || || || || | || |||||| | || | || Sbjct 2236332 TTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTA 2236273 Query 62675 C---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC-------- 62723 | |||| | ||| | | || | ||| || ||| | | | | Sbjct 2236272 CGAGTGACCAC--CTTCGTG-ATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTA 2236216 Query 62724 -CATCTATTACAAACATG--TTCAAT-GCAACAGATGCCAGATTACAAACGGCTACCTCA 62779 |||| || ||| | | | || |||| ||| |||| ||||| || || || Sbjct 2236215 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCT 2236156 Query 62780 TTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 62839 | | | ||| | | |||||| ||||| ||| | || ||| || || Sbjct 2236155 TCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAG 2236096 Query 62840 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 62899 || | || || | || |||||||| ||||||||||| | |||||||||||||| ||| Sbjct 2236095 TTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTT 2236036 Query 62900 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 62959 || |||| | || | || || | ||| | | | || || || | ||||| | Sbjct 2236035 TCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGAT----GGTTTGTCT 2235980 Query 62960 CTCTT----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63015 | ||| |||||||| | |||| | ||| || || || || | || | Sbjct 2235979 TCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920 Query 63016 GTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 63075 | | || |||||| ||| ||| | | || | ||| || || | | | || | Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860 Query 63076 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 63135 |||||| || |||||||| ||||| ||||| ||||||||||||| ||| |||||| Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800 Query 63136 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 63195 ||||| ||||| || || | || || | || || | |||||| |||||||| Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740 Query 63196 GTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 63255 ||| | || | | ||||| || ||||| || || ||||| | || | ||||||||| Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680 Query 63256 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATA 63315 || ||||||||| ||||||||||||||| || || ||||| || || || | || || Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620 Query 63316 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63375 | ||| |||||||||||||| ||| | ||| ||||| || || |||| || || Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560 Query 63376 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 ||| || ||| || || |||||||| || || || || |||||| |||| || Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 || ||||| |||||||| | || || || || ||||| | |||||||| || Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440 Query 63496 GTGAGTAAACCATTT----TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 63551 |||||| || | || ||| |||| ||||| || |||||| | | || | Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAG----TTGTAGGTTTCAATAACCCTTGCAATGT 2235384 Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611 | |||||| || | ||||||||||| | | ||| ||||| | ||| | | | Sbjct 2235383 CATCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACAT 2235324 Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-T 63670 || || ||| ||| | ||| ||| ||||||| || || || ||||| || || || | Sbjct 2235323 TGCCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTAATTATACT 2235264 Query 63671 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 63730 ||||| |||| ||||| | |||| | ||||| || | ||| | ||| | ||| | Sbjct 2235263 GAAAA-TCTCTATCGTAGACAATAGCAGAGTTCAGCTCATCAGCGTGTTTCTGAACAA-- 2235207 Query 63731 TCCATGGTAA---TACT-TGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATA 63786 | |||| | || |||| | |||| | || ||||| || || || |||| || Sbjct 2235206 --TGTTGTAAGTGTCCTCAGAAACTAAAGGAGAGTGCTTCCCGTTCTTTGGGTTGATGTA 2235149 Query 63787 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 63846 | | || || | |||| | | || | || | || | |||||||| ||| || Sbjct 2235148 TTCATACAACTCTTTGGTCACCTGAGAGTATTGCTTAGTAGTCTGTTTGTGTAAATTGGA 2235089 Query 63847 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAGTGGC 63903 || || ||||| || || | |||||||||||| ||||| | || || || || || Sbjct 2235088 AACAGCAATTCTTGCTGCCAAAATGGCATAATCGGGATGAATAGTGGTCATATAA---GC 2235032 Query 63904 TGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || |||| || || || | |||| || || || |||||||| | ||| Sbjct 2235031 AGCAGTTTCAGCAGCAAGGTTATCCAGCTCCACGGTAGTTACACCGTGATA 2234981 >seq2 Length=2687137 Score = 196 bits (216), Expect = 6e-45 Identities = 563/861 (65%), Gaps = 10/861 (1%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| ||| || | |||||||| || || || ||||| | || || || || Sbjct 442716 TTTTGGTAATCAGAAACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTC 442775 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||||||||| ||||||||||| || || || | |||||| |||| | | Sbjct 442776 TCCATGAAATCAAATGGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGT 442835 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | |||||| || || || || | ||| ||||| || |||||||| | | Sbjct 442836 AGTCTATCAGCAACGAACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAG 442895 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 ||| |||||||| | || | || || |||||| ||| || ||||| ||||| Sbjct 442896 GAAACAGGAAGAGCATCTGTGAAGTATCTTTTTTCAATCTCGACAGCCTCTGTAATAATC 442955 Query 32610 GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 32669 | || |||| ||||| | | | || || || | ||| || || || Sbjct 442956 TTTTCAACGATTTCCTCACTGGCTCTGTTGTTCAAGTGAGAGAATAGCAAGCAAGCAAAG 443015 Query 32670 TCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 32729 ||| ||||| || || ||||| | ||| | || ||||| || || | || ||||| Sbjct 443016 TCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATA 443075 Query 32730 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCT 32789 || || | |||||| | ||| || || || || || || || |||||||| || ||||| Sbjct 443076 AGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCA 443135 Query 32790 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCA-CTT 32845 || || || ||||||| | | || | | || ||||| ||||| || Sbjct 443136 ACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTC 443195 Query 32846 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 || ||||| || ||||| | ||| | ||| || || ||||| || ||||| || | | Sbjct 443196 ATG-GCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAA 443254 Query 32906 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 32965 | ||| || |||||| | || ||||||||||| | || |||| || || Sbjct 443255 TTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTG 443314 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 ||||| || || |||||||| ||||| || ||| | || |||| || || || || Sbjct 443315 GATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTC 443374 Query 33026 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33085 | | || ||| | ||||||||||| || || || ||| ||| |||||||| || Sbjct 443375 AGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGC 443434 Query 33086 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTCCAATCATTGA 33141 | || |||||||| || || | || ||| | |||||||| |||| | Sbjct 443435 AAGAACTCTAGAGATAAAATACTTCTCAT-TGTCGTTCATACGATTATTCCAGTCATGCA 443493 Query 33142 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 33201 ||| || | || | ||| || | |||||||| || || || |||| ||| |||| Sbjct 443494 AATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACA 443553 Query 33202 TATTCCAGATGTCATGATATT 33222 | | ||||||||| ||||||| Sbjct 443554 TTTGCCAGATGTCGTGATATT 443574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631912875600