Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 4e-25
seq3 84.2 5e-11
>seq2
Length=2687137
Score = 131 bits (144), Expect = 4e-25
Identities = 182/255 (71%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 334100 AATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 334159
||||||||||| | | ||| | || || || |||| ||||| || ||||| |
Sbjct 122127 AATGAAGTCAACAGTGGAGGTGTCGGCTTCAGAACCATCGATGTCGTGCTCGACGTAGAC 122068
Query 334160 AGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCAT 334219
|||| | | ||||| ||| ||||| ||||||| |||||||| ||||||| | |||
Sbjct 122067 AGTTCTACATTCATCCTGAGATGGGAAGCCTTCAACTTGACCGTTGGCAATAGCTCTCAT 122008
Query 334220 CAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAG 334279
|| || || ||||| || ||||| || ||||||||||| || || | | | ||||||
Sbjct 122007 CAAGGTAGACTTACCAGCACCGTTGGGACCACACAGACCATAACGTCTAGCTCTCTTCAG 121948
Query 334280 ATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATC 334339
| ||| | || |||||||| | || || |||| || ||||| || || ||||| |
Sbjct 121947 ACGGAATTGAGTCTTGTTCAGCAAGATCTTAGCACCGTAAGCCAGGGAGAACTCACAGTT 121888
Query 334340 ACACAGATCCTCACC 334354
||| || || |||||
Sbjct 121887 ACATAGGTCTTCACC 121873
>seq3
Length=1828518
Score = 84.2 bits (92), Expect = 5e-11
Identities = 114/158 (72%), Gaps = 12/158 (8%)
Strand=Plus/Plus
Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241
||||| ||||| || ||||| || |||||| | ||||||||| |||||||| || |||
Sbjct 858479 GGGAAACCTTCTAGTTGACCATTAGCAATAGATCTCATCAGAGTAGATTTACCTGCACCG 858538
Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGC------GTATTG 334295
|| | |||||||||||||| | || || |||||| |||| | || |||
Sbjct 858539 TTACGTCCACACAGACCGTATCTGT---GACCCTTCAG---CAACCTCAAGGTTGTCTTG 858592
Query 334296 TTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTC 334333
|| || || ||| | | |||||| |||| ||| || ||
Sbjct 858593 TTAAGCAGCATTCTACTACCATAAGCCAAAGAGAAATC 858630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879844562850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |