Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 228 1e-54 seq2 131 2e-25 >seq1 Length=3325186 Score = 228 bits (252), Expect = 1e-54 Identities = 952/1478 (64%), Gaps = 61/1478 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | || || || || || ||||| |||| |||||| || |||| || || Sbjct 2236722 TAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAA 2236663 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| ||||| | ||||| ||| | ||||| | |||| | Sbjct 2236662 GCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCT 2236603 Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAG----CTTTGTCTCCCCCTGCCACATATCAAAC 114115 ||||| | ||||| || | | | || |||| | |||| ||| |||| || Sbjct 2236602 TTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTGTCCC------ACAAATCATAC 2236549 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175 || | ||||| || || ||||| || || | ||| || ||||| | || || | | Sbjct 2236548 TGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACG 2236489 Query 114176 GCCAATTCGGAGCTCG---CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 || |||||| |||| | || | |||| | || || || || || ||||| | | Sbjct 2236488 GCTAATTCG---CTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATA 2236432 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 114292 || | | ||| ||||| |||||||| | || || || || || |||| || Sbjct 2236431 TTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCT 2236372 Query 114293 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 114352 | |||||| ||||| | ||||||| | || | ||| || || | | ||| ||| Sbjct 2236371 AAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTCCTAGCC-TCTGG 2236313 Query 114353 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411 | | || || | || || ||||||| || || | || ||||| ||||| ||||| Sbjct 2236312 AACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGAT 2236253 Query 114412 TTCATGAAGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGG 114465 ||||| |||||||| || | ||| | |||| || || | ||| | || Sbjct 2236252 GTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGG 2236193 Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525 ||| || || || |||| ||||| |||| || || || || ||||| | ||| Sbjct 2236192 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAAT 2236133 Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585 || ||| | || || |||||| ||||||||||| || || | || |||| Sbjct 2236132 CTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTT 2236073 Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645 ||| |||||||| || | |||| |||| || || || || || || | || ||| || || Sbjct 2236072 ACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGC 2236013 Query 114646 CTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACT 114701 | ||| | | |||| | ||| ||| || || || |||| ||||| Sbjct 2236012 GTACCAAAGCTTTTGGGCTTTGA---TGG-TTTGTCTTCCACGACCTTCCTTTTCGTATC 2235957 Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761 || ||| || ||||||| || || || | | || | || || || |||| | || Sbjct 2235956 TTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTG 2235897 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 | |||| || | ||||| ||| || || || | |||||||| || || ||||||| Sbjct 2235896 GAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCC 2235837 Query 114822 AGAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880 | ||||| | ||| ||||| | | | || ||| || | || || || ||| | Sbjct 2235836 ATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTTTTCCATGGTTCTTACGAATG 2235778 Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 114940 || | |||| | | ||| ||||| ||||| ||||||| ||||| || | || || | Sbjct 2235777 TCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACC---A 2235721 Query 114941 CGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994 | || |||| | || | ||||| | || ||| || || || | | |||| Sbjct 2235720 GGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATT 2235661 Query 114995 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGA 115052 ||||| ||||| | || || || || || || || || || |||| | | Sbjct 2235660 GGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCT--GTGGCACGAA 2235603 Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112 || ||| ||||||| |||||| || || || || || ||| || || ||| | | Sbjct 2235602 TATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCA 2235543 Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACA 115172 | | | || || || || ||||||||| || | || | | ||| || ||||| Sbjct 2235542 AAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACA 2235483 Query 115173 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT 115232 ||||||| || ||||||||||| || || || || | ||||| |||| ||| ||| Sbjct 2235482 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATA-CTT 2235425 Query 115233 GGGACATCTTA---TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 115289 ||| || || | |||||| || | || | |||||| || || |||||||||| Sbjct 2235424 CTGAC-TCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGA 2235366 Query 115290 TCGAGACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTG 115347 | | ||| ||||||| | || ||| || ||| | || || | |||| | ||| | Sbjct 2235365 TAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACA--TTGCCATTAATTCTCAG 2235308 Query 115348 GAGGTAA-CTCTTCTCCAAGGTCTTGAGACCAAAATAA 115384 |||||| |||| ||||||||||||| ||||| ||| Sbjct 2235307 AAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTAA 2235271 >seq2 Length=2687137 Score = 131 bits (144), Expect = 2e-25 Identities = 386/583 (66%), Gaps = 19/583 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | || || || | | | || || ||||| |||||| || ||| Sbjct 443010 GCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 443069 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| ||||| | ||| ||||||||||| || | | || || ||||| |||||||| Sbjct 443070 GGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATA 443129 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225 || || ||| ||||| |||| | ||| ||||| || | || | | | | ||| Sbjct 443130 CCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA-CAAAGCATCGTCATCGGCAAT 443188 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA- 126283 ||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || | Sbjct 443189 CCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAA 443248 Query 126284 -AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 |||| ||| |||||| ||||||||||||||| |||| || | ||| || Sbjct 443249 CAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGAGTAA 443303 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 |||||| ||||| | | ||| || | ||| | |||| ||| | |||||| Sbjct 443304 GTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTTCGGG 443362 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 | || |||||| || || || | | ||| ||| ||||| ||||| || | Sbjct 443363 AAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGC 443422 Query 126460 AGCAAAAAACGCCAGGA-TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 126515 ||||||||| || || | | || || || | || ||||| ||||||| | | | Sbjct 443423 AGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGATTAT 443481 Query 126516 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAG 126575 ||||||| | | |||||| | |||| ||||| ||||||||| | || | Sbjct 443482 TCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGG 443541 Query 126576 CCTTCTTATAGAGTTCCCAAAGGTGGGGATACTTCAGGGGGAA 126618 ||| || || | || ||| | || | |||| |||| ||||| Sbjct 443542 CCTGTTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAA 443584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353517863880