Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 228 1e-54
seq2 131 2e-25
>seq1
Length=3325186
Score = 228 bits (252), Expect = 1e-54
Identities = 952/1478 (64%), Gaps = 61/1478 (4%)
Strand=Plus/Minus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| || | || || || || || ||||| |||| |||||| || |||| || ||
Sbjct 2236722 TAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAA 2236663
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| || ||||| ||||| | ||||| ||| | ||||| | |||| |
Sbjct 2236662 GCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCT 2236603
Query 114062 TTGAGGGCGTCCCAGTCGTA--GTTGAG----CTTTGTCTCCCCCTGCCACATATCAAAC 114115
||||| | ||||| || | | | || |||| | |||| ||| |||| ||
Sbjct 2236602 TTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTGTCCC------ACAAATCATAC 2236549
Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175
|| | ||||| || || ||||| || || | ||| || ||||| | || || | |
Sbjct 2236548 TGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACG 2236489
Query 114176 GCCAATTCGGAGCTCG---CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232
|| |||||| |||| | || | |||| | || || || || || ||||| | |
Sbjct 2236488 GCTAATTCG---CTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATA 2236432
Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 114292
|| | | ||| ||||| |||||||| | || || || || || |||| ||
Sbjct 2236431 TTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCT 2236372
Query 114293 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 114352
| |||||| ||||| | ||||||| | || | ||| || || | | ||| |||
Sbjct 2236371 AAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTCCTAGCC-TCTGG 2236313
Query 114353 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 114411
| | || || | || || ||||||| || || | || ||||| ||||| |||||
Sbjct 2236312 AACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGAT 2236253
Query 114412 TTCATGAAGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGG 114465
||||| |||||||| || | ||| | |||| || || | ||| | ||
Sbjct 2236252 GTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGG 2236193
Query 114466 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 114525
||| || || || |||| ||||| |||| || || || || ||||| | |||
Sbjct 2236192 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAAT 2236133
Query 114526 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 114585
|| ||| | || || |||||| ||||||||||| || || | || ||||
Sbjct 2236132 CTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTT 2236073
Query 114586 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 114645
||| |||||||| || | |||| |||| || || || || || || | || ||| || ||
Sbjct 2236072 ACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGC 2236013
Query 114646 CTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACT 114701
| ||| | | |||| | ||| ||| || || || |||| |||||
Sbjct 2236012 GTACCAAAGCTTTTGGGCTTTGA---TGG-TTTGTCTTCCACGACCTTCCTTTTCGTATC 2235957
Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761
|| ||| || ||||||| || || || | | || | || || || |||| | ||
Sbjct 2235956 TTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTG 2235897
Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821
| |||| || | ||||| ||| || || || | |||||||| || || |||||||
Sbjct 2235896 GAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCC 2235837
Query 114822 AGAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880
| ||||| | ||| ||||| | | | || ||| || | || || || ||| |
Sbjct 2235836 ATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTTTTCCATGGTTCTTACGAATG 2235778
Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 114940
|| | |||| | | ||| ||||| ||||| ||||||| ||||| || | || || |
Sbjct 2235777 TCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACC---A 2235721
Query 114941 CGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994
| || |||| | || | ||||| | || ||| || || || | | ||||
Sbjct 2235720 GGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATT 2235661
Query 114995 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGA 115052
||||| ||||| | || || || || || || || || || |||| | |
Sbjct 2235660 GGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCT--GTGGCACGAA 2235603
Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112
|| ||| ||||||| |||||| || || || || || ||| || || ||| | |
Sbjct 2235602 TATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCA 2235543
Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACA 115172
| | | || || || || ||||||||| || | || | | ||| || |||||
Sbjct 2235542 AAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACA 2235483
Query 115173 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTT 115232
||||||| || ||||||||||| || || || || | ||||| |||| ||| |||
Sbjct 2235482 TTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATA-CTT 2235425
Query 115233 GGGACATCTTA---TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 115289
||| || || | |||||| || | || | |||||| || || ||||||||||
Sbjct 2235424 CTGAC-TCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGA 2235366
Query 115290 TCGAGACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTG 115347
| | ||| ||||||| | || ||| || ||| | || || | |||| | ||| |
Sbjct 2235365 TAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACA--TTGCCATTAATTCTCAG 2235308
Query 115348 GAGGTAA-CTCTTCTCCAAGGTCTTGAGACCAAAATAA 115384
|||||| |||| ||||||||||||| ||||| |||
Sbjct 2235307 AAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTAA 2235271
>seq2
Length=2687137
Score = 131 bits (144), Expect = 2e-25
Identities = 386/583 (66%), Gaps = 19/583 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| | || || || | | | || || ||||| |||||| || |||
Sbjct 443010 GCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 443069
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||| ||||| | ||| ||||||||||| || | | || || ||||| ||||||||
Sbjct 443070 GGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATA 443129
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAA 126225
|| || ||| ||||| |||| | ||| ||||| || | || | | | | |||
Sbjct 443130 CCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA-CAAAGCATCGTCATCGGCAAT 443188
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA- 126283
||| |||| ||||| | ||||||| | |||||| || | ||||| ||| || || |
Sbjct 443189 CCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAA 443248
Query 126284 -AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340
|||| ||| |||||| ||||||||||||||| |||| || | ||| ||
Sbjct 443249 CAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGAGTAA 443303
Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399
|||||| ||||| | | ||| || | ||| | |||| ||| | ||||||
Sbjct 443304 GTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTTCGGG 443362
Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459
| || |||||| || || || | | ||| ||| ||||| ||||| || |
Sbjct 443363 AAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGC 443422
Query 126460 AGCAAAAAACGCCAGGA-TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 126515
||||||||| || || | | || || || | || ||||| ||||||| | | |
Sbjct 443423 AGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGATTAT 443481
Query 126516 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAG 126575
||||||| | | |||||| | |||| ||||| ||||||||| | || |
Sbjct 443482 TCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGG 443541
Query 126576 CCTTCTTATAGAGTTCCCAAAGGTGGGGATACTTCAGGGGGAA 126618
||| || || | || ||| | || | |||| |||| |||||
Sbjct 443542 CCTGTTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAA 443584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353517863880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |