Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 215 6e-51 seq2 143 3e-29 >seq1 Length=3325186 Score = 215 bits (238), Expect = 6e-51 Identities = 947/1473 (64%), Gaps = 53/1473 (4%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | || || || || || ||||| |||| |||||| || |||| || || Sbjct 2236722 TAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAA 2236663 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| ||||| | ||||| ||| | ||||| | |||| | Sbjct 2236662 GCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCT 2236603 Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAG----CTTTGTCTCCCCCTCCCACATATCAAAC 116076 ||||| | ||||| || | | | || |||| | |||| ||| |||| || Sbjct 2236602 TTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTGTCCC------ACAAATCATAC 2236549 Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136 || | ||||| || || ||||| || || | ||| || || || | || || | | Sbjct 2236548 TGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACG 2236489 Query 116137 GCCAATTCGGAGCTCG---CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193 || |||||| |||| | || | |||| | || || || || || ||||| | | Sbjct 2236488 GCTAATTCG---CTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATA 2236432 Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253 || | | ||| ||||| |||||||| | || | || || || |||| || Sbjct 2236431 TTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCT 2236372 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313 | |||||| ||||| | ||||||| | || | ||| || || | | ||| ||| Sbjct 2236371 AAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTCCTAGCC-TCTGG 2236313 Query 116314 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372 | | || || | || || ||||||| || || | || ||||| ||||| ||||| Sbjct 2236312 AACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGAT 2236253 Query 116373 TTCATGAAGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGG 116426 ||||| |||||||| || | ||| | |||| || || | ||| | || Sbjct 2236252 GTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGG 2236193 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 ||| || || || |||| ||||| |||| || || || || ||||| | ||| Sbjct 2236192 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAAT 2236133 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 || ||| | || || |||||| ||||||||||| || || | || |||| Sbjct 2236132 CTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTT 2236073 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| |||||||| || | ||| |||| || || || || || || | || ||| || || Sbjct 2236072 ACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGC 2236013 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACT 116662 | ||| | | |||| | ||| ||| || || || |||| ||||| Sbjct 2236012 GTACCAAAGCTTTTGGGCTTTGA---TGG-TTTGTCTTCCACGACCTTCCTTTTCGTATC 2235957 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTG 116722 || ||| || | ||||| || || || | || | || || || |||| | || Sbjct 2235956 TTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTG 2235897 Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 116782 || |||| || | ||||| ||| || || |||| |||||||| || || ||||||| Sbjct 2235896 GAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCC 2235837 Query 116783 AGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 | || |||| ||| ||||| | | | || ||| || | || || || ||| | Sbjct 2235836 ATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTTTTCCATGGTTCTTACGAATG 2235778 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901 || | |||| | | ||| ||||| ||||| ||||||| ||||| || | || || | Sbjct 2235777 TCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGG 2235718 Query 116902 CG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 || |||| | || | ||||| | || || ||| || || | | ||||||| Sbjct 2235717 CGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATTGGA 2235658 Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATC 117017 || ||||| | || || || || || ||| || | || |||| | | || Sbjct 2235657 ATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG-TGGCACGAATATT 2235599 Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 || ||||||| |||||| || || || || || ||| || || ||| | | | | Sbjct 2235598 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAGT 2235539 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 | || || || || ||||||||| || | || | | ||| || ||||||||| Sbjct 2235538 ATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACATTTG 2235479 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197 ||| || ||||||||||| || || || || | ||||| |||| ||| ||| || Sbjct 2235478 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATA-CTTCTGA 2235421 Query 117198 CATCTTA---TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 | || || | |||||| || | || | |||||| || || ||||||||||| | Sbjct 2235420 C-TCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATAGC 2235362 Query 117255 GACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGAGG 117312 ||| ||||||| | || ||| || ||| | || || | |||| | ||| | ||| Sbjct 2235361 GACACGCATAATTAAGTGTTGAGGACGTTCTGCAACA--TTGCCATTAATTCTCAGAAGG 2235304 Query 117313 TAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 117344 ||| |||| ||||||||||||| ||||| || Sbjct 2235303 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 2235272 >seq2 Length=2687137 Score = 143 bits (158), Expect = 3e-29 Identities = 391/587 (67%), Gaps = 25/587 (4%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | || || || | | | || || ||||| |||||| || ||| Sbjct 443009 AGCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 443068 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||| ||||| | ||| ||||||||||| || | | || ||||| || |||||||| Sbjct 443069 TGGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGAT 443128 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGG----CAAAGGAGCGGGACTTTGTAT 127694 || || ||| ||||| |||| | ||| || | ||||| | | | | | | Sbjct 443129 ACCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATC--GTCATCG--G 443184 Query 127695 CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-T 127753 ||| ||| |||| ||||| | ||||||| | ||||||||| | ||||| ||| || | Sbjct 443185 CAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCAT 443244 Query 127754 TCA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGA 127809 | | |||| ||| |||||| ||||||||||||||| |||| || | ||| Sbjct 443245 TGAACAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGA 443299 Query 127810 ATATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTT 127868 || |||||| ||||| | | ||| || | ||| | |||| ||| | |||| Sbjct 443300 GTAAGTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTT 443358 Query 127869 CGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 127928 || | || |||||| || || || | | ||| ||| ||||| ||||| | Sbjct 443359 CGGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAG 443418 Query 127929 ACCCAGCAAAAAACGCCAGGA-TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 127984 | |||||||||| || || | | || || || | || ||||| ||||||| | Sbjct 443419 AGGCAGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGA 443477 Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATT 128044 | |||||||| | | ||||||| | |||| ||||| ||||||||| | | Sbjct 443478 TTATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCT 443537 Query 128045 TGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091 | |||| || || | || ||||| || | |||| |||| ||||| Sbjct 443538 TCGGCCTGTTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAA 443584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507115642760