Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 215 6e-51
seq2 143 3e-29
>seq1
Length=3325186
Score = 215 bits (238), Expect = 6e-51
Identities = 947/1473 (64%), Gaps = 53/1473 (4%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||| | || || || || || ||||| |||| |||||| || |||| || ||
Sbjct 2236722 TAGATGTTAGAAGTATAAGGTTCGAAACACTCGTTGTAACCCAAAATCTGGGAAGTTGAA 2236663
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || ||||| ||||| | ||||| ||| | ||||| | |||| |
Sbjct 2236662 GCAGTAGGCATAGGTGCAACTAGAAGCGAGTTTCTAAGACCTGTCGAAATAATCTTGGCT 2236603
Query 116023 TTGAGGGCGTCCCAGTCGTA--GTTGAG----CTTTGTCTCCCCCTCCCACATATCAAAC 116076
||||| | ||||| || | | | || |||| | |||| ||| |||| ||
Sbjct 2236602 TTGAGTGACTCCCATTCCCACAGCTCAGAGGGCTTTTTGTCCC------ACAAATCATAC 2236549
Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136
|| | ||||| || || ||||| || || | ||| || || || | || || | |
Sbjct 2236548 TGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAAGCTCCTTCCTCAACG 2236489
Query 116137 GCCAATTCGGAGCTCG---CCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193
|| |||||| |||| | || | |||| | || || || || || ||||| | |
Sbjct 2236488 GCTAATTCG---CTCGAGGCTTCCAAGGCTCCATGGTAGATAGTTTCGAAAATCTGGATA 2236432
Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253
|| | | ||| ||||| |||||||| | || | || || || |||| ||
Sbjct 2236431 TTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTCATGAAAGCATCAGCT 2236372
Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313
| |||||| ||||| | ||||||| | || | ||| || || | | ||| |||
Sbjct 2236371 AAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTCCTAGCC-TCTGG 2236313
Query 116314 A-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 116372
| | || || | || || ||||||| || || | || ||||| ||||| |||||
Sbjct 2236312 AACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACCACCTTCGTGAT 2236253
Query 116373 TTCATGAAGCTTTTC---GTAATCAAAACTGCGAGTCTCTTCATTG---ACATACTTAGG 116426
||||| |||||||| || | ||| | |||| || || | ||| | ||
Sbjct 2236252 GTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGTATCATCGGTTTCAACAAAGGCTGG 2236193
Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486
||| || || || |||| ||||| |||| || || || || ||||| | |||
Sbjct 2236192 AAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTGGGGAAGAATACTCAACAAT 2236133
Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546
|| ||| | || || |||||| ||||||||||| || || | || ||||
Sbjct 2236132 CTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCTTCTGGTTGGTTTTCTTGTT 2236073
Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606
||| |||||||| || | ||| |||| || || || || || || | || ||| || ||
Sbjct 2236072 ACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTGTCTGTGCCTCGAGGATGGC 2236013
Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACT 116662
| ||| | | |||| | ||| ||| || || || |||| |||||
Sbjct 2236012 GTACCAAAGCTTTTGGGCTTTGA---TGG-TTTGTCTTCCACGACCTTCCTTTTCGTATC 2235957
Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTG 116722
|| ||| || | ||||| || || || | || | || || || |||| | ||
Sbjct 2235956 TTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAGGCCAGGAGCCTCACTTG 2235897
Query 116723 GACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCC 116782
|| |||| || | ||||| ||| || || |||| |||||||| || || |||||||
Sbjct 2235896 GAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCATGAACAGATCAGGGATCC 2235837
Query 116783 AGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841
| || |||| ||| ||||| | | | || ||| || | || || || ||| |
Sbjct 2235836 ATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTTTTCCATGGTTCTTACGAATG 2235778
Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTG 116901
|| | |||| | | ||| ||||| ||||| ||||||| ||||| || | || || |
Sbjct 2235777 TCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACAAAGCAAATGCACCAGGG 2235718
Query 116902 CG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958
|| |||| | || | ||||| | || || ||| || || | | |||||||
Sbjct 2235717 CGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTTGTTGAAAACTCTCACCATTGGA 2235658
Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGACATC 117017
|| ||||| | || || || || || ||| || | || |||| | | ||
Sbjct 2235657 ATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGGATCCTG-TGGCACGAATATT 2235599
Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077
|| ||||||| |||||| || || || || || ||| || || ||| | | | |
Sbjct 2235598 ATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTAAAGCACATTCCTTCAAAGT 2235539
Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137
| || || || || ||||||||| || | || | | ||| || |||||||||
Sbjct 2235538 ATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTAAGAAACATGACGACATTTG 2235479
Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197
||| || ||||||||||| || || || || | ||||| |||| ||| ||| ||
Sbjct 2235478 TGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGTGAGTGAA-ATA-CTTCTGA 2235421
Query 117198 CATCTTA---TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
| || || | |||||| || | || | |||||| || || ||||||||||| |
Sbjct 2235420 C-TCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCACCATGAATACCGATAGC 2235362
Query 117255 GACCCGCATAAACATGTATTG-GGGTGTT-TCCATCAGGATACCATCGAGCCTCTGGAGG 117312
||| ||||||| | || ||| || ||| | || || | |||| | ||| | |||
Sbjct 2235361 GACACGCATAATTAAGTGTTGAGGACGTTCTGCAACA--TTGCCATTAATTCTCAGAAGG 2235304
Query 117313 TAA-CTCTTCTCCAAGGTCTTGAGACCAAAATA 117344
||| |||| ||||||||||||| ||||| ||
Sbjct 2235303 TAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 2235272
>seq2
Length=2687137
Score = 143 bits (158), Expect = 3e-29
Identities = 391/587 (67%), Gaps = 25/587 (4%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| | || || || | | | || || ||||| |||||| || |||
Sbjct 443009 AGCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACC 443068
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
|||||| ||||| | ||| ||||||||||| || | | || ||||| || ||||||||
Sbjct 443069 TGGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGAT 443128
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGG----CAAAGGAGCGGGACTTTGTAT 127694
|| || ||| ||||| |||| | ||| || | ||||| | | | | | |
Sbjct 443129 ACCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATC--GTCATCG--G 443184
Query 127695 CAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-T 127753
||| ||| |||| ||||| | ||||||| | ||||||||| | ||||| ||| || |
Sbjct 443185 CAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCAT 443244
Query 127754 TCA--AAGAGTTC--CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGA 127809
| | |||| ||| |||||| ||||||||||||||| |||| || | |||
Sbjct 443245 TGAACAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGA 443299
Query 127810 ATATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTT 127868
|| |||||| ||||| | | ||| || | ||| | |||| ||| | ||||
Sbjct 443300 GTAAGTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTT 443358
Query 127869 CGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 127928
|| | || |||||| || || || | | ||| ||| ||||| ||||| |
Sbjct 443359 CGGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAG 443418
Query 127929 ACCCAGCAAAAAACGCCAGGA-TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GG 127984
| |||||||||| || || | | || || || | || ||||| ||||||| |
Sbjct 443419 AGGCAGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGA 443477
Query 127985 GTCTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATT 128044
| |||||||| | | ||||||| | |||| ||||| ||||||||| | |
Sbjct 443478 TTATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCT 443537
Query 128045 TGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 128091
| |||| || || | || ||||| || | |||| |||| |||||
Sbjct 443538 TCGGCCTGTTTGTACATTTGCCAGATGTCGTGATATTTCAAAGGGAA 443584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507115642760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |