Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 100 5e-16 >seq1 Length=3325186 Score = 100 bits (110), Expect = 5e-16 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 |||||| || || ||||||||||| |||||| | || | | ||| |||||||| | Sbjct 2237110 CTTGTCAACTGTAAACTGAATGGCAGCAGCGGCAG-CTTGAGTACGCAGGTAGTACATAC 2237052 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC-GTTG 203956 | ||||||| || |||| ||| || || | ||||||| | || ||| | || |||| Sbjct 2237051 CAGTCTTTAATCCTTTCTTCCAACCATAGAAGTGCATGCTGGTCAATTTACCCATAGTTG 2236992 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC-GCCCGATCTGC 204015 | | | | | ||||||||||| ||||| ||||||||| | |||| | | || || Sbjct 2236991 GAGACATC-AGGTGAATGTTCAACGACTGAGATTGGTCGAT-ATAGGCTGATCTGTCCGC 2236934 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||||| || || ||||| || || |||||||| || ||||| Sbjct 2236933 AGCCATATCAATGATAGTCTTTTGAGATATCTCCCAAACTGTCTT 2236889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155090666160