Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 228 3e-54 seq4 149 2e-30 seq2 113 2e-19 seq3 104 9e-17 >seq1 Length=3325186 Score = 228 bits (252), Expect = 3e-54 Identities = 865/1330 (65%), Gaps = 52/1330 (4%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 |||||||| |||| || || | | || ||||| ||||| ||| |||||||| Sbjct 473574 GGAAAGCCTAATATCCAGGTCGAATTCAAGGGTGAGACTAAGGTTTTCAGCCCTGAAGAG 473633 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| |||||||| || || |||||||| || || || || || ||| |||| | | Sbjct 473634 ATTTCCTCTATGGTCCTAACAAAAATGAAGGATACTGCTGAGCAGTAT-TTGGGTGAGAA 473692 Query 451313 GTT-ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 | | | |||||||| |||||||||| ||||| ||||||||| | ||| ||||||| || Sbjct 473693 GATCAACGATGCAGTTGTTACTGTTCCTGCTTACTTCAATGATTCTCAAAGGCAAGCCAC 473752 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 ||| ||||| || | ||||||||||| || |||| ||||||| ||||| || || || Sbjct 473753 TAAGGATGCTGGTCTAATTGCTGGTTTGAACGTTCAAAGAATTATCAATGAGCCAACTGC 473812 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA------GAAGaaaaaaaTAT 451485 ||||| | || || ||| | ||| || ||||| || | ||| | || || Sbjct 473813 TGCTGCAATTGCCTACGGA-TTGGACAA--GAAAGATGCAGGCCACGGTGAACACAACAT 473869 Query 451486 TTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG 451545 | | | || ||| | ||||| |||||| ||| ||| || | || ||||| || || Sbjct 473870 TCTTATTTTCGATCTGGGTGGGGGAACTTTCGATGTTTCCCTATTATCTATTGATGAAGG 473929 Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | || ||||| ||||| || ||||| ||||| | || ||||| || | ||||| Sbjct 473930 TATTTTCGAAGTCAAGGCTACTGCAGGTGACACTCACTTGGGTGGTGAGGACTTCGATAA 473989 Query 451606 TGCAATTGTGGAATGGTTGAAAACTGATGTTCA-ACGAAAACTAA-AAGTAGATATTTCT 451663 | | || | || | | || || | | |||||||| ||| ||| |||| Sbjct 473990 CAGATTAGTCAATCATTTCATTGCCGAATTTAAGAGAAAAACTAAGAAG--GATCTTTCC 474047 Query 451664 ACTAACCAAAAAGCACTTAGACGTCTTAAAAC-----ATCAGCAGAAAAAGCTAAAATTA 451718 || ||||| | | | | ||| | | | ||| | ||| |||| || || Sbjct 474048 ACAAACCAGAGATCCTTGAGAAGATTAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTG 474107 Query 451719 CACTCAGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGA-T 451777 ||| ||| ||||||| || || | |||||| ||| | || || || || | Sbjct 474108 TCCTC--TTCTGCACAAAC--CT-CCATTGAGATTGATTCTTTGTTCGAGGGTATTGACT 474162 Query 451778 TATGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTT----TGC 451833 | | | ||| | | || | |||| ||| || ||||| || | | || | | Sbjct 474163 TCTAC-ACTTCGATCACTAGAGCTAGATTCGAGGAGCTTTGTGCCGATCTGTTCAGATCC 474221 Query 451834 ACGGGTAATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAG-ATAAAA 451892 || || | || ||||| ||| ||| | || || || |||| ||| | || Sbjct 474222 AC----TATCGAGCCCGTTGAGAGAGTCTTAAAAGACTC-CAAGTTAGACAAGTCTCAAG 474276 Query 451893 TTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGT 451952 || |||| ||||| | || || ||||| || ||||||| ||| || ||| || | || Sbjct 474277 TTCATGAGATTGTTTTGGTTGGTGGTTCGACCAGAATTCC-AAAGGTCCAGAAAT-TAGT 474334 Query 451953 CTTCTTA-TTTTGGA--GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTG 452009 |||| | |||| | || || | | | ||| | || || ||||| || |||| Sbjct 474335 -TTCTGACTTTTTCAATGGTAAGGAGCCAAACAAGTCAATCAACCCAGATGAGGCCGTTG 474393 Query 452010 CATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGA----TGATGAAAAATTA 452065 |||| |||||||| || ||||||||||| | | || ||| | | || | | Sbjct 474394 CATACGGTGCTGCTGTACAAGCAGCTATATTGTCTGG---AGATACCTCTTCCAAGACT- 474449 Query 452066 GGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGA 452125 ||| | || || ||||||| | ||||||||| | || |||| || |||||||| Sbjct 474450 CAAGACTTGCTATTGCTAGATGTTGCTCCTCTATCTTTGGGTATTGAGACCGCTGGTGGT 474509 Query 452126 ATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTT 452185 || |||||||| | || | || || | ||||| || ||| ||| ||| Sbjct 474510 ATCATGACTAAGCTGATCCCAAGAAACTCTACGATTCCAGCCAAGAAGTCGGAAATTTTT 474569 Query 452186 AGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| ||| |||||||||||||| |||||||| || ||||| ||| | | Sbjct 474570 TCGACATATGCTGACAACCAACCAGGTGTTTTGATTCAAGTTTTCGAAGGTGAAAGAACT 474629 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 | || || || || | || | ||| ||||| |||||||| ||| Sbjct 474630 AGAACCAAGGACAACAACCTGTTGGGTAAGTTTGAACTTTCTGGTATTCCTCCAGCTCCA 474689 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || |||||||||||| | || | || | ||||| |||||||| | ||||| Sbjct 474690 AGAGGTGTTCCTCAAATTGAGGTCACTTTCGACATGGATGCCAATGGTATCTTGAATGTT 474749 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425 ||| |||||||| |||| || | |||| ||||| ||||| || || || Sbjct 474750 TTTGCTGTTGAAAAGGGTACTGGTAAGACTCAAAAGATTACTATTACCAACGACAAGGGT 474809 Query 452426 CGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGAT 452485 | || || || ||||| || || | |||||| |||||| ||||||||||||||||| Sbjct 474810 AGATTGTCCAAGGAAGACATCGAGAGAATGGTTTCTGAAGCTGAAAAATTCAAGGATGAA 474869 Query 452486 GATGAACAAG 452495 || | ||||| Sbjct 474870 GACG-ACAAG 474878 >seq4 Length=1577441 Score = 149 bits (164), Expect = 2e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| || || ||||| ||||| |||||||| || || ||||| Sbjct 1240618 AATGCAGATTTTTGTGAAAACCCTAACAGGTAAGACTATCACTCTTGAGGTGGAGTCATC 1240559 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | || || ||||| || |||||||| |||||||||||||| Sbjct 1240558 AGACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCA 1240499 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||||| || |||| || ||| | ||||| || |||||| | | || ||||| Sbjct 1240498 GCAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAA 1240439 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || |||||||| || | ||| | ||||| Sbjct 1240438 CATTCAAAAGGAATCCACTCTTCACTTGGTCCTGAGATTAAGAGG 1240394 Score = 143 bits (158), Expect = 1e-28 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || | || || || |||||||| || || || || ||||| Sbjct 1239933 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1239874 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || ||||| || |||||||| |||||||||||||| Sbjct 1239873 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1239814 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| || |||| || ||| | ||||| || |||||| | | || ||||| Sbjct 1239813 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1239754 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || ||||||||||| |||||| |||| || Sbjct 1239753 ATTCAAAAGGAATCCACTCTTCACTTAGTTTTAAGATTGAGGGG 1239710 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || | || || || |||||||| || || || || ||||| Sbjct 1240161 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1240102 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || ||||| || |||||||| |||||||||||||| Sbjct 1240101 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1240042 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| || |||| || ||| | ||||| || |||||| | | || ||||| Sbjct 1240041 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1239982 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || |||||||| || | ||| | ||||| Sbjct 1239981 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTGAGATTAAGAGG 1239938 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || | || || || |||||||| || || || || ||||| Sbjct 1240389 ATGCAAATCTTCGTCAAGACCTTAACCGGCAAGACTATTACCCTCGAGGTGGAGTCATCA 1240330 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || || ||||| || |||||||| |||||||||||||| Sbjct 1240329 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAAGGTATTCCTCCTGATCAG 1240270 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| || |||| || ||| | ||||| || |||||| | | || ||||| Sbjct 1240269 CAACGTTTAATCTTTGCAGGTAAGCAATTGGAAGACGGCAGAACTCTTTCTGACTATAAC 1240210 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || |||||||| || | ||| | ||||| Sbjct 1240209 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTGAGATTAAGAGG 1240166 Score = 120 bits (132), Expect = 1e-21 Identities = 203/291 (70%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||| |||| || |||| ||||| ||||| ||||| || || ||||| ||||| ||| Sbjct 280859 GTCACTCATGCTGTTGTTACCGTTCCAGCTTACTTCAACGACGCTCAACGTCAAGCCACT 280800 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | || || ||||| | ||||| ||||| |||| || ||||| || Sbjct 280799 AAGGATGCCGGTCTCATCGCCGGTTTGACCGTTCTGAGAATTGTTAACGAGCCTACCGCC 280740 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| || || || || || ||| || | | || |||| | | || | || Sbjct 280739 GCTGCCCTTGCTTACGG-CTTGGACAAG--ACTGGT---GAGGAAAGACAGATCATTGTC 280686 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 | ||| || ||||||||||| |||| |||| | ||||| ||||| | ||| | ||| Sbjct 280685 TATGACTTGGGTGGAGGAACCTTTGATGTTTCTCTGCTTTCCATTGAGGGTGGTGCTTTT 280626 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || || || ||| ||||| ||||| | || ||||| || ||||| Sbjct 280625 GAGGTTCTTGCTACCGCCGGTGACACTCACTTGGGTGGTGAGGACTTTGAT 280575 >seq2 Length=2687137 Score = 113 bits (124), Expect = 2e-19 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || | || ||||| || ||||| | || || || || || Sbjct 1170121 AATGCAGATTTTCGTCAAGACCTTAACCGGTAAGACCATTACCTTGGAAGTCGAGTCCTC 1170062 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| || | || || |||||||| |||||||||||||||||||| || Sbjct 1170061 CGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCTGACCA 1170002 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| ||||| | || || ||| | ||||| || |||||| || | || || || Sbjct 1170001 ACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTGTCCGACTACAA 1169942 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||| | || | ||| ||||||| Sbjct 1169941 CATCCAGAAGGAGTCTACTTTGCACCTGGTTCTGAGATTGAGAGG 1169897 >seq3 Length=1828518 Score = 104 bits (114), Expect = 9e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || || ||||| ||||| || | || || || || || Sbjct 868735 AATGCAAATTTTCGTAAAGACCCTTACCGGTAAGACTATCACCTTGGAGGTGGAGTCTTC 868794 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | || || ||||| || ||||| |||||||||||||| || Sbjct 868795 CGACACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCA 868854 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | || || | || || ||| | || ||||| ||||||||| | || || || Sbjct 868855 ACAGCGTCTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAA 868914 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||| || | ||| ||||||| Sbjct 868915 CATCCAAAAGGAGTCTACCTTGCACTTGGTCCTTAGATTGAGAGG 868959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718121547188