Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 1e-46
seq3 93.3 5e-14
seq2 89.7 6e-13
>seq1
Length=3325186
Score = 201 bits (222), Expect = 1e-46
Identities = 886/1382 (64%), Gaps = 33/1382 (2%)
Strand=Plus/Plus
Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686
||||| ||||| |||||||| ||||| || || |||| ||| | || || ||| ||
Sbjct 2235353 ATGCGTGTCGCTATCGGTATTCATGGTGATGACATTGCAAGGGTTATTGAAACCTACAAC 2235412
Query 111687 AAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745
||| | | |||| |||| ||||| | || || || || ||||||||||| ||
Sbjct 2235413 TTTATGAGTCAGAAGTAT-TTCACTCACGCCTCTCCTACTCTGTTTAACGCTGGTACCCC 2235471
Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805
|| |||||||| |||||| | |||| | ||| || || || | || ||
Sbjct 2235472 TCACCCACAAATGTCGTCATGTTTCTTAGTTGCCATGCGGGATGACTCGATTGAAGGTAT 2235531
Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865
||| | ||| | | |||||||| ||| || || |||||||| || || ||||
Sbjct 2235532 TTATGATACTTTGAAGGAATGTGCTTTAATTTCCAAAACTGCTGGTGGAATTGGTTTGCA 2235591
Query 111866 CATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAATGGTCAATCAGATG 111924
||| ||| || | | ||| ||| | || ||| ||||| || ||| || | |
Sbjct 2235592 CATTCATAATATTCGTGCC-ACAGGATCCTACATTGCTGGTACTAACGGTACTTCGAACG 2235650
Query 111925 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGC 111984
|||||||||||||| | | || || ||| ||| || || ||||| | |||| ||
Sbjct 2235651 GTATTATTCCAATGGTGAGAGTTTTCAACAACACCGCTCGTTATGTTGATCAAGGTG--- 2235707
Query 111985 GTCGCAAGGGATCTATCGCAGT--CTAT---CTT-GAGCCATGGCACGCGGATATCATGG 112038
|| |||| | || ||| | || | ||| || |||||||| ||||| ||| | |
Sbjct 2235708 GTAACAAGCGCCCTGGTGCATTTGCTTTGTACTTGGAACCATGGCATGCGGACATCTTCG 2235767
Query 112039 AGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC-GCGATCTCTTC 112097
|| |||| | ||| ||||| || | ||||| | | ||| | ||||| |||
Sbjct 2235768 CCTTTATTGACATTCGTAAGAACCATGGAAAAGAGGA-AATCAGAGCCAGAGATCTATTC 2235826
Query 112098 TCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCT 112157
| ||||| ||||| || ||||| |||||||| || || || ||| |||| | ||| |
Sbjct 2235827 CCGGCTCTATGGATCCCTGATCTGTTCATGAAAAGGGTCGAACAGAATGGCGAATGGACC 2235886
Query 112158 CTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCC 112217
|| || | |||| |||| || || || |||| | | || || || |||||||
Sbjct 2235887 CTGTTCTCTCCAAGTGAGGCTCCTGGCCTTGCCGACGTCTACGGCGATGAATTTGAAGAA 2235946
Query 112218 CTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTG 112277
|| ||| || ||||| | ||| |||| | | || | ||| | |
Sbjct 2235947 CTGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAAACCATCAAAGCCCAAAAGCTT 2236006
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
||| | || || ||| || | || || || || ||||| |||| ||| | || || ||
Sbjct 2236007 TGGTACGCCATCCTCGAGGCACAGACAGAAACCGGTACTCCATTCATGTTGTATAAGGAT 2236066
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|| |||||| | || | || || ||||| |||||||| || || || ||||| |||
Sbjct 2236067 GCTTGTAACAAGAAAACCAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACCTTTGT 2236126
Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457
|| || | || | | | | ||| || || ||||| |||||| | || || ||
Sbjct 2236127 TGTGAGATTGTTGAGTATTCTTCCCCAGAAGAAACTGCTGTCTGTAACTTGGCTTCTATT 2236186
Query 112458 GCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----ATTATGAAAAACTC 112511
||||| || | ||| || | || || | || ||| | | |||||| ||
Sbjct 2236187 GCTCTTCCAGCCTTTGTTGAAACCGATGATACTCACTGTTGGTACAACTTTGAAAAGCTG 2236246
Query 112512 CACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTAC 112571
|| || | ||||| ||||| ||| | |||||| |||| || ||||| | |||
Sbjct 2236247 CATGACATCACGAAGGTGGTCACTCGTAACTTGAACAGAATTATCGACAGAAACTACTAC 2236306
Query 112572 CCCGTT-GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCA 112630
|| ||| ||| ||| | | ||| || ||| | | | ||||||| | | ||||| ||
Sbjct 2236307 CCGGTTCCAGA-GGCTAGGAGATCCAACATGCGTAATAGACCAATTGCTGTTGGTGTTCA 2236365
Query 112631 AGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGA 112690
|||| | || |||| ||||| | | | |||||||||| || || ||| |
Sbjct 2236366 AGGTTTAGCTGATGCTTTCATGAAGTTGAGAATCCCATTTGATTCTCCAGAGGCTAAGCA 2236425
Query 112691 AATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG--AGGCGAGTTCGGAG 112748
| | ||| | || || || || || || || | || |||| || | | | ||
Sbjct 2236426 ACTTAATATCCAGATTTTCGAAACTATCTACCATGGAGC-CTTGGAAGCCTCGAGC-GAA 2236483
Query 112749 TTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTG 112808
|| || | | || || | || ||||||||| | ||||||||||| || || || |
Sbjct 2236484 TTAGCCGTTGAGGAAGGAGCTTACGAAACCTTTCAAGGTTCTCCAGCATCTCAGGGTATT 2236543
Query 112809 CTTCAATTTGATATGTGGGAAGGTGAGACC---AAGCTTCACTACGACTGGGACGCTCTC 112865
| || | |||| ||||||| || || |||| | || ||||| | |||
Sbjct 2236544 TTGCAGTATGATTTGTGGGACAAAAAGCCCTCTGAGCT---GTGGGAATGGGAGTCACTC 2236600
Query 112866 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACA 112925
|| | || | || |||||| | ||| ||| | | ||||| ||||| ||
Sbjct 2236601 AAAGCCAAGATTATTTCGACAGGTCTTAGAAACTCGCTTCTAGTTGCACCTATGCCTACT 2236660
Query 112926 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATC 112985
|| || || | || || |||||| | || || || || ||||| || || | ||||||
Sbjct 2236661 GCTTCAACTTCCCAGATTTTGGGTTACAACGAGTGTTTCGAACCTTATACTTCTAACATC 2236720
Query 112986 TA 112987
||
Sbjct 2236721 TA 2236722
>seq3
Length=1828518
Score = 93.3 bits (102), Expect = 5e-14
Identities = 211/313 (67%), Gaps = 11/313 (4%)
Strand=Plus/Plus
Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115
||||| | |||||| || ||||||| |||| || | || || ||| || || |
Sbjct 1567937 TTTCCAATGGCATCGATTTCATCAACAAAGATAATACTAGGAGCATCTTCTCGTGCTGTT 1567996
Query 16116 TCAAAGAGATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173
| ||| ||||| || || | ||| || || ||||| |||||||| |||||||| | ||
Sbjct 1567997 TTAAAAAGATCACGAACTC--TTGAAGCTCCAACACCCACAAACATTTCCACAAATTCTG 1568054
Query 16174 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233
| ||| | | || || ||| || |||||| || |||| || | |||||
Sbjct 1568055 AACCAGAAACTGAGTAAAATGGAACACCAGCTTCACCAGCTGTGGCCTTTGCCAAAAGAG 1568114
Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---AC 16290
||||||| |||||||| ||| | || | ||||||| |||||| || || || |
Sbjct 1568115 TCTTACCAGTACCTGGAGGACCAGAAAGAATAGCACCTCTTGGAATTTTAGCTCCTAGCC 1568174
Query 16291 TTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGG 16350
|| | |||| | |||| | ||| | ||| | |||| ||| | ||| |||||||
Sbjct 1568175 TTTC---GTATTTGGCAGGGTTCTTCAAAAACTTGACAAACTCCATTATTTCCTCTTTGG 1568231
Query 16351 CGGCGTCA-ATCC 16362
| ||||| ||||
Sbjct 1568232 CTTCGTCACATCC 1568244
>seq2
Length=2687137
Score = 89.7 bits (98), Expect = 6e-13
Identities = 339/521 (65%), Gaps = 16/521 (3%)
Strand=Plus/Minus
Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158
|||||| | || |||||||||| || | || || || ||||| |||| ||| |||
Sbjct 443242 GCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTGCC 443183
Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217
| | | || || || ||||| || | | || || || |||||| ||||||||
Sbjct 443182 GATGACGATGCTTTG-TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATCTT 443124
Query 102218 CTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCT 102277
||| || || || ||| |||| | ||| | || ||| ||||||| ||||||||| |
Sbjct 443123 CTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGTTT 443064
Query 102278 CTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTG 102335
||||||||| |||||||| | | || || ||| | ||| || ||||| | |
Sbjct 443063 GACCTTCTCCAATGAGCTTATTTGCAGAGATGAAGGATTACACACCGACTTTGCTTGCTT 443004
Query 102336 GAACTTTTCAAATTATTGCGTATTA-AACCAACGACTGAGACTATTCATTCTATTGTTAA 102394
| || ||| ||| | | | ||| || || | || | ||| |||
Sbjct 443003 G--CTATTCTCTCACTTGAACAACAGAGCCAGTGA-GGAAATCGTTGAAAAGATTATTAC 442947
Query 102395 GGAAGCCGTTGAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGG 102454
|| || || |||||||| || ||| | | ||||| ||||| | | | ||
Sbjct 442946 AGAGGCTGTCGAGATTGAAAAAAGATACTTCACAGATGCTCTTCCTGTTTCCTTGCTGGG 442887
Query 102455 TATGAATTCTGAA--AAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTGAAG 102512
||||| ||| | ||||| | | ||| |||||| || |||||||| | || |
Sbjct 442886 AATGAA--CTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGATAGACTACTG--G 442831
Query 102513 CAGATCGGGGTGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACA 102570
|| || ||| | || | | ||| || ||||||||||| |||||||||||||
Sbjct 442830 TAGCTCTGGGCAACAAAAAAGTGTACAACGTCACCAATCCATTTGATTTCATGGAGAACA 442771
Query 102571 TTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGTT 102611
|| | | || ||||| ||||||||||||||||| |||
Sbjct 442770 TTTCTTTGGCTGGTAAGACCAACTTCTTCGAAAAGAGAGTT 442730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742314647920
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