Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 232 8e-56 >seq1 Length=3325186 Score = 232 bits (256), Expect = 8e-56 Identities = 954/1491 (64%), Gaps = 29/1491 (2%) Strand=Plus/Minus Query 109726 AATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCA 109785 ||||| ||||| | | || || ||||||||||| || || |||||||||||||| Sbjct 2236749 AATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACTCG 2236690 Query 109786 TTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTT 109845 |||| || | || || | ||| ||||| || ||||| || || | ||||| |||| Sbjct 2236689 TTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAGAAGCGAGTTT 2236630 Query 109846 CGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAAT 109905 | ||||| ||| | | | | | || ||||| || | || || | Sbjct 2236629 CTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTC----CCACAGCTCAGA 2236574 Query 109906 TTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTG 109965 | || ||||||| ||| || | | ||||| || || |||||||| ||| Sbjct 2236573 G--GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACC-TTG 2236517 Query 109966 AAAC-TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATG 110024 ||| | ||||| | || || | |||| || ||| || || || | || |||| Sbjct 2236516 AAAGGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATG 2236457 Query 110025 ATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAG 110084 || ||||| || ||||| || ||| | | || |||| | | || || || | Sbjct 2236456 GTAGATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGAT 2236397 Query 110085 ACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTT 110144 | | || || |||| |||| ||| |||||||| | | |||| || | || Sbjct 2236396 TCTCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACG 2236337 Query 110145 CATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAG 110204 |||||| || | | ||| | || ||||| |||| | |||||| | | || | Sbjct 2236336 CATGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAA 2236277 Query 110205 ATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT---TTCGT 110261 || || || ||||||||| ||||| || || || | | | || | || Sbjct 2236276 GTTACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGT 2236217 Query 110262 CTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTC 110318 || | | | ||| | || ||||||||||| || | || || |||| ||| || Sbjct 2236216 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTC 2236157 Query 110319 GTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAA 110378 ||| | | || || | ||| || ||| | ||| || |||||||||||||| Sbjct 2236156 TTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAA 2236097 Query 110379 GTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGT 110438 ||||||||| || | ||| ||| || ||||||||||| | |||| |||| ||||| || Sbjct 2236096 GTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGT 2236037 Query 110439 TTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGC 110498 ||| ||||||| || ||| ||||| | ||| | | ||| || ||| | | Sbjct 2236036 TTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCC 2235977 Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558 ||||||||| ||||| | ||||| || |||||||| | ||||| || || | Sbjct 2235976 ACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGC 2235917 Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618 ||| || |||| ||| |||| |||| ||| | ||| || || ||||| || Sbjct 2235916 AAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTT 2235857 Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCAT 110677 ||||||||| ||||| ||||| | |||| ||| || || | ||| || || || | Sbjct 2235856 CATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTT 2235798 Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737 || ||||| || | || | |||| | | ||| |||| ||||||||||| | | Sbjct 2235797 TTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGT 2235738 Query 110738 AGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGG 110791 | | ||| | || | | | || ||| | || | |||||| || || ||| Sbjct 2235737 ACAAAGCAA---ATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGT 2235681 Query 110792 CATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTC 110851 ||||| || || | ||| |||||||| || | || ||| || ||||| ||| Sbjct 2235680 TGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGT 2235621 Query 110852 TGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAA 110911 ||| |||||||||| | || || |||| |||||| ||||| || || || Sbjct 2235620 AGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAA 2235561 Query 110912 TTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAA 110971 || ||||| || | | ||| |||||||||| |||||||| || || |||||| Sbjct 2235560 TTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAA 2235501 Query 110972 TTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCG 111031 || || || || ||||| || || |||| || || || || || || ||||| | | Sbjct 2235500 CTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGG 2235441 Query 111032 CATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCT 111090 | ||| |||| | || | || ||| |||||| || || | | | | || Sbjct 2235440 CGTGAGTGAA-ATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCA 2235382 Query 111091 TTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTT 111150 | ||| |||||||| || || || ||||| | | | |||||| ||| | || Sbjct 2235381 TCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATTG 2235322 Query 111151 CCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200 |||| || | | |||||||| |||| || | |||||||| |||||||| Sbjct 2235321 CCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 2235272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975919015800