Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 232 8e-56
>seq1
Length=3325186
Score = 232 bits (256), Expect = 8e-56
Identities = 954/1491 (64%), Gaps = 29/1491 (2%)
Strand=Plus/Minus
Query 109726 AATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCA 109785
||||| ||||| | | || || ||||||||||| || || ||||||||||||||
Sbjct 2236749 AATTCTCCAGCTAATACACGACGTGAGTAGATGTTAGAAGTATAAGGTTCGAAACACTCG 2236690
Query 109786 TTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTT 109845
|||| || | || || | ||| ||||| || ||||| || || | ||||| ||||
Sbjct 2236689 TTGTAACCCAAAATCTGGGAAGTTGAAGCAGTAGGCATAGGTGCAACTAGAAGCGAGTTT 2236630
Query 109846 CGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAAT 109905
| ||||| ||| | | | | | || ||||| || | || || |
Sbjct 2236629 CTAAGACCTGTCGAAATAATCTTGGCTTTGAGTGACTCCCATTC----CCACAGCTCAGA 2236574
Query 109906 TTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTG 109965
| || ||||||| ||| || | | ||||| || || |||||||| |||
Sbjct 2236573 G--GGCTTTTTGTCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACC-TTG 2236517
Query 109966 AAAC-TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATG 110024
||| | ||||| | || || | |||| || ||| || || || | || ||||
Sbjct 2236516 AAAGGTTTCGTAAGCTCCTTCCTCAACGGCTAATTCGCTCGAGGCTTCCAAGGCTCCATG 2236457
Query 110025 ATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAG 110084
|| ||||| || ||||| || ||| | | || |||| | | || || || |
Sbjct 2236456 GTAGATAGTTTCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGAT 2236397
Query 110085 ACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTT 110144
| | || || |||| |||| ||| |||||||| | | |||| || | ||
Sbjct 2236396 TCTCAACTTCATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACG 2236337
Query 110145 CATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAG 110204
|||||| || | | ||| | || ||||| |||| | |||||| | | || |
Sbjct 2236336 CATGTTGGATCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAA 2236277
Query 110205 ATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTT---TTCGT 110261
|| || || ||||||||| ||||| || || || | | | || | ||
Sbjct 2236276 GTTACGAGTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGTGAGT 2236217
Query 110262 CTCCT---TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTC 110318
|| | | | ||| | || ||||||||||| || | || || |||| ||| ||
Sbjct 2236216 ATCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTC 2236157
Query 110319 GTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAA 110378
||| | | || || | ||| || ||| | ||| || ||||||||||||||
Sbjct 2236156 TTCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAA 2236097
Query 110379 GTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGT 110438
||||||||| || | ||| ||| || ||||||||||| | |||| |||| ||||| ||
Sbjct 2236096 GTTCTTCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGT 2236037
Query 110439 TTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGC 110498
||| ||||||| || ||| ||||| | ||| | | ||| || ||| | |
Sbjct 2236036 TTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCC 2235977
Query 110499 GAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGA 110558
||||||||| ||||| | ||||| || |||||||| | ||||| || || |
Sbjct 2235976 ACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGC 2235917
Query 110559 AAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTT 110618
||| || |||| ||| |||| |||| ||| | ||| || || ||||| ||
Sbjct 2235916 AAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTT 2235857
Query 110619 CATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCAT 110677
||||||||| ||||| ||||| | |||| ||| || || | ||| || || || |
Sbjct 2235856 CATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTT 2235798
Query 110678 CACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGAT 110737
|| ||||| || | || | |||| | | ||| |||| ||||||||||| | |
Sbjct 2235797 TTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGT 2235738
Query 110738 AGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGG 110791
| | ||| | || | | | || ||| | || | |||||| || || |||
Sbjct 2235737 ACAAAGCAA---ATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGT 2235681
Query 110792 CATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTC 110851
||||| || || | ||| |||||||| || | || ||| || ||||| |||
Sbjct 2235680 TGTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGT 2235621
Query 110852 TGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAA 110911
||| |||||||||| | || || |||| |||||| ||||| || || ||
Sbjct 2235620 AGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAA 2235561
Query 110912 TTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAA 110971
|| ||||| || | | ||| |||||||||| |||||||| || || ||||||
Sbjct 2235560 TTAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAA 2235501
Query 110972 TTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCG 111031
|| || || || ||||| || || |||| || || || || || || ||||| | |
Sbjct 2235500 CTAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGG 2235441
Query 111032 CATGAATGAACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCT 111090
| ||| |||| | || | || ||| |||||| || || | | | | ||
Sbjct 2235440 CGTGAGTGAA-ATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCA 2235382
Query 111091 TTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTT 111150
| ||| |||||||| || || || ||||| | | | |||||| ||| | ||
Sbjct 2235381 TCACCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGGACGTTCTGCAACATTG 2235322
Query 111151 CCATCAACACGCTGAAGGTAA-CTCTTCTCTAGGGTCTTGAGACCAAAGTA 111200
|||| || | | |||||||| |||| || | |||||||| ||||||||
Sbjct 2235321 CCATTAATTCTCAGAAGGTAAGATCTT-TCCAAGGTCTTGAATCCAAAGTA 2235272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975919015800
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