Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 187 3e-42 seq3 113 5e-20 seq2 95.1 1e-14 >seq1 Length=3325186 Score = 187 bits (206), Expect = 3e-42 Identities = 795/1241 (64%), Gaps = 39/1241 (3%) Strand=Plus/Minus Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153 ||||||| |||| | || | | || || || | |||||||| | ||| || || || Sbjct 2236563 TCCCACAAATCATACTGCAAAATACCCTGAGATGCTGGAGAACCTTGAAAGGTTTCGTAA 2236504 Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCG---CCTCCAGGGATGCGTGATACATGGTT 106210 | |||| | | || ||||| ||||| | |||| || | | || || || ||| Sbjct 2236503 GCTCCTTCCTCAACGGCTAATTC---GCTCGAGGCTTCCAAGGCTCCATGGTAGATAGTT 2236447 Query 106211 TCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA 106270 || || || | ||| | | ||| || || |||||||||| | | || Sbjct 2236446 TCGAAAATCTGGATATTAAGTTGCTTAGCCTCTGGAGAATCAAATGGGATTCTCAACTTC 2236387 Query 106271 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC 106330 || || |||| || | |||||||||||| | | |||| ||||| | ||||| || || Sbjct 2236386 ATGAAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGA- 2236328 Query 106331 TTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTG 106387 || | || ||| ||| || || | |||||||| || | || ||| | || Sbjct 2236327 --TCTCCTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGA 2236270 Query 106388 GTAACAATCTTTGTGATTTCATGAAGTTTTTCATA-----ATCAAAAGTGCGAGTCTCTT 106442 || || | ||| ||||| ||||| || |||||| | | ||| ||| |||| || | Sbjct 2236269 GTGACCACCTTCGTGATGTCATGCAGCTTTTCAAAGTTGTACCAACAGT--GAGTATCAT 2236212 Query 106443 C---ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCT 106499 | | ||| | |||||| || || || ||||| || || ||||| || || || Sbjct 2236211 CGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCTTCTG 2236152 Query 106500 TATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCT 106559 | ||||| | ||| || ||| | ||| || ||||| ||||| |||| Sbjct 2236151 GGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAGTTCT 2236092 Query 106560 TTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCG 106619 | ||||| | || ||||| || |||||||| || | |||| | || || || || || | Sbjct 2236091 TCTGGTTGGTTTTCTTGTTACAAGCATCCTTATACAACATGAATGGAGTACCGGTTTCTG 2236032 Query 106620 TCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGC--TGGTACAATGGCGTTGGCCCG 106677 |||||| || ||| || || | ||| | | ||| || | || | | | || Sbjct 2236031 TCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTC--TTCCACG 2235974 Query 106678 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 106737 || ||| ||||| || ||| || ||||||| || || || |||||| || Sbjct 2235973 ACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTCGGCAAG 2235914 Query 106738 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 106797 || || |||| |||| |||| || | ||||| ||| || || |||| ||||| Sbjct 2235913 GCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCTTTTCAT 2235854 Query 106798 GAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCAC 106856 ||| || || || ||||| || | | || |||||||| | | || || || | | Sbjct 2235853 GAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGA-TTTCCTCTTTTC 2235795 Query 106857 CTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT-CAAG---A 106912 | ||||| || | |||| || | | ||| ||||| |||||||| | |||| | Sbjct 2235794 CATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAAGTACA 2235735 Query 106913 TAG--ACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGT 106970 || | ||| || | ||| | ||| |||||| ||||| || || ||| || Sbjct 2235734 AAGCAAATGCACCAGGGCGCTTGTTA---CCACCTTGATCAACATAACGAGCGGTGTTGT 2235678 Query 106971 TAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAG 107030 | || || | | ||||||||||||||| | || ||| || || || ||| | Sbjct 2235677 TGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAGG 2235618 Query 107031 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 107090 || |||| | | || ||| ||||||| ||||| || ||||| || || ||| Sbjct 2235617 ATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAATTA 2235558 Query 107091 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 107150 ||||| ||| | | ||| |||| ||||| | || ||||| ||| |||| | | Sbjct 2235557 AAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAACTA 2235498 Query 107151 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 107210 ||| || ||||| || || || |||||||| || || || || || | |||| Sbjct 2235497 AGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGCGT 2235438 Query 107211 GAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCC 107269 || |||| |||| | || ||| || ||| || || | || ||||||| || Sbjct 2235437 GAGTGAA-ATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATCA 2235379 Query 107270 CCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 || || || ||||| || |||||||||| | || ||| || Sbjct 2235378 CCATGAATACCGATAGCGACACGCATAATTAAGTGTTGAGG 2235338 >seq3 Length=1828518 Score = 113 bits (124), Expect = 5e-20 Identities = 213/311 (68%), Gaps = 7/311 (2%) Strand=Plus/Plus Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 ||||| | |||||| || ||||||| |||| ||||| || || ||| || || || Sbjct 1567937 TTTCCAATGGCATCGATTTCATCAACAAAGATAATACTAGGAGCATCTTCTCGTGCTGTT 1567996 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 | ||| ||||| ||||| ||| || || ||||| |||||||| |||||||| | || Sbjct 1567997 TTAAAAAGATCACGAACTCTTGAAGCTCCAACACCCACAAACATTTCCACAAATTCTGAA 1568056 Query 9483 GCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 9542 | ||| | | || || ||| || |||||| || |||| || | ||||||| Sbjct 1568057 CCAGAAACTGAGTAAAATGGAACACCAGCTTCACCAGCTGTGGCCTTTGCCAAAAGAGTC 1568116 Query 9543 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC---ACTT 9599 ||||| |||||||| ||| | || | ||||| | |||||| || || || ||| Sbjct 1568117 TTACCAGTACCTGGAGGACCAGAAAGAATAGCACCTCTTGGAATTTTAGCTCCTAGCCTT 1568176 Query 9600 CCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 9659 | |||| | |||| | ||| | ||| | |||| ||| | ||| |||||||| Sbjct 1568177 TC---GTATTTGGCAGGGTTCTTCAAAAACTTGACAAACTCCATTATTTCCTCTTTGGCT 1568233 Query 9660 GCGTCA-ATCC 9669 ||||| |||| Sbjct 1568234 TCGTCACATCC 1568244 >seq2 Length=2687137 Score = 95.1 bits (104), Expect = 1e-14 Identities = 380/589 (65%), Gaps = 27/589 (5%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | || ||||||| | ||||||| ||||| |||||| | ||| Sbjct 443010 GCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCT 443069 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| ||||| | ||| |||||||| | |||| ||| || || || ||||||||| Sbjct 443070 GGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATA 443129 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT----GTC 117449 || || ||| || || |||| | || || ||||| | | | | || | | Sbjct 443130 CCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAA----CAAAGCATCGTCATCGGC 443185 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 || |||| |||| ||||| | ||||| | | |||||||| | || | |||||| | Sbjct 443186 AATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATT 443245 Query 117510 AAATAA-----CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAA 117564 || || | | |||||| | ||| || ||||| | |||||||| ||| Sbjct 443246 GAACAAGAATTCGGATTCTTT-----TGGATCTTTGATGTAAGTATCAATCAACAATGAG 443300 Query 117565 TATGTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTC 117623 || |||||| || | | | ||| || | |||| | |||| || | ||||| Sbjct 443301 TAAGTTTCGGAGTGGATGTTCTCCATCAT-GATTTGAAAACCGTAAAAACATTTTGCTTC 443359 Query 117624 GCTTATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 117683 | | || || ||| | || || | | ||| ||| ||||| ||||| || Sbjct 443360 GGGAAGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGA 443419 Query 117684 CCCAGCAAAGAATGCCAGGA-TGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGG 117739 ||||||| || || || | | || || || | ||| ||||| || |||| | Sbjct 443420 GGCAGCAAAAAAGGCAAGAACTCTA-GAGATAAAATACTTCTCATTGTCGTTCATACGAT 443478 Query 117740 TCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTT 117799 | |||||||| | | ||| || ||| || | ||| || ||||||||| | || Sbjct 443479 TATTCCAGTCATGCAAATCCTTTCCCAAGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTT 443538 Query 117800 GAGCCTTTTTATAGAGTTCCCAGA-GTTGTGGATACTTCAGGGGGAAGA 117847 |||| ||| || | || ||||| || || |||| |||| ||||||| Sbjct 443539 CGGCCTGTTTGTACATTTGCCAGATGTCGT-GATATTTCAAAGGGAAGA 443586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980718877640