Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 8e-24
>seq3
Length=1828518
Score = 125 bits (138), Expect = 8e-24
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266
|| ||| |||||| || || ||||| | || || || || | || ||| | || |||
Sbjct 1700403 ATCGGTAAAGGATTTTACGGCACCATCATCCCTCCCGTGATTCTTCGTAACTTACTCGAG 1700344
Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326
||||| | |||||||||||||||||||| ||||| |||| | ||||||||||||
Sbjct 1700343 AATCCAGGATGGTACACATCTTACACTCCATATCAGCCTGAAGTGAGCCAGGGAAGATTG 1700284
Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386
||| |||||| |||| ||||| |||| | || || ||||| | ||| | || ||
Sbjct 1700283 GAAAGTTTATTGAATTTTCAAACTGTCATTAGTGATCTGACAGGCCTCCCAGTCGCCAAT 1700224
Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|| || || || ||||| | | || || ||||||||||||
Sbjct 1700223 GCTTCCCTTTTGGATGAGTCTTCGGCGGCTGCAGAAGCAATG 1700182
Score = 93.3 bits (102), Expect = 5e-14
Identities = 163/235 (69%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATAT 154929
||| ||| |||| ||||| || ||| |||| | |||||| || |||| | | ||
Sbjct 1698706 TATGATGGTTACCTACCCTTCGACATATGGGCTTTTTGAACCTGGTATTATCGATGCCAT 1698647
Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989
|| ||| |||| || ||||||| || ||||| | ||||| || || | ||||| |
Sbjct 1698646 CAAA-ATCATTCACAACCATGGTGGACAAGTATACTTAGATGGTGCTAACATGAATGCTC 1698588
Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049
| || ||| || || ||| | || || || ||||||||||||||||| || || |
Sbjct 1698587 AAGTGGGATTAACATCCCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTGCACA 1698528
Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
| || || ||||| || || || ||||| || || || ||||| || ||||
Sbjct 1698527 AGACTTTTGCCATTCCTCACGGTGGGGGAGGACCAGGTGTTGGTCCAATTTGTGT 1698473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212720358240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |