Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 125 8e-24 >seq3 Length=1828518 Score = 125 bits (138), Expect = 8e-24 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 153207 ATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAG 153266 || ||| |||||| || || ||||| | || || || || | || ||| | || ||| Sbjct 1700403 ATCGGTAAAGGATTTTACGGCACCATCATCCCTCCCGTGATTCTTCGTAACTTACTCGAG 1700344 Query 153267 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 153326 ||||| | |||||||||||||||||||| ||||| |||| | |||||||||||| Sbjct 1700343 AATCCAGGATGGTACACATCTTACACTCCATATCAGCCTGAAGTGAGCCAGGGAAGATTG 1700284 Query 153327 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAAC 153386 ||| |||||| |||| ||||| |||| | || || ||||| | ||| | || || Sbjct 1700283 GAAAGTTTATTGAATTTTCAAACTGTCATTAGTGATCTGACAGGCCTCCCAGTCGCCAAT 1700224 Query 153387 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || || || || ||||| | | || || |||||||||||| Sbjct 1700223 GCTTCCCTTTTGGATGAGTCTTCGGCGGCTGCAGAAGCAATG 1700182 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATAT 154929 ||| ||| |||| ||||| || ||| |||| | |||||| || |||| | | || Sbjct 1698706 TATGATGGTTACCTACCCTTCGACATATGGGCTTTTTGAACCTGGTATTATCGATGCCAT 1698647 Query 154930 GTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCAC 154989 || ||| |||| || ||||||| || ||||| | ||||| || || | ||||| | Sbjct 1698646 CAAA-ATCATTCACAACCATGGTGGACAAGTATACTTAGATGGTGCTAACATGAATGCTC 1698588 Query 154990 AGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATA 155049 | || ||| || || ||| | || || || ||||||||||||||||| || || | Sbjct 1698587 AAGTGGGATTAACATCCCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTGCACA 1698528 Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || || ||||| || || || ||||| || || || ||||| || |||| Sbjct 1698527 AGACTTTTGCCATTCCTCACGGTGGGGGAGGACCAGGTGTTGGTCCAATTTGTGT 1698473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212720358240