Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 >seq3 Length=1828518 Score = 131 bits (144), Expect = 2e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941 || ||| |||||| || || ||||||| || || || || | || ||| | || ||| Sbjct 1700403 ATCGGTAAAGGATTTTACGGCACCATCATCCCTCCCGTGATTCTTCGTAACTTACTCGAG 1700344 Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001 ||||| | |||||||||||||||||||| ||||| |||| | |||||||||||| Sbjct 1700343 AATCCAGGATGGTACACATCTTACACTCCATATCAGCCTGAAGTGAGCCAGGGAAGATTG 1700284 Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061 ||| |||||| |||| ||||| |||| | || || ||||| || || | || || Sbjct 1700283 GAAAGTTTATTGAATTTTCAAACTGTCATTAGTGATCTGACAGGCCTCCCAGTCGCCAAT 1700224 Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || || ||||| | | || || |||||||||||| Sbjct 1700223 GCTTCCCTTTTGGATGAGTCTTCGGCGGCTGCAGAAGCAATG 1700182 Score = 114 bits (126), Expect = 2e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 |||||||||||| ||||| | || || |||||||| |||||||| |||||| | Sbjct 1699818 CAAAGGTTTGGTGTTCCTTTAGGTTATGGAGGTCCCCATGCTGCTTTCTTTTCTGTTGTT 1699759 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || | | | |||| || ||||| |||||||| ||| || ||| | ||| Sbjct 1699758 GAGAGCTTGCAACGAAAAATCCCTGGAAGAATTGTTGGTGTCTCGAAGGATCGACTAGGA 1699699 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || || || | |||||||| |||| || || || |||||||||| |||||| | ||| Sbjct 1699698 AACAACGCTTTGAGATTAGCTTTACAAACCAGGGAACAGCATATCAAAAGAGAAAGAGCC 1699639 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATAT 158663 || ||| ||||| |||||||||||| || | || ||||| Sbjct 1699638 ACTTCTAATATCTGTACAGCACAAGCATTGTTAGCCAATAT 1699598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 450/699 (64%), Gaps = 26/699 (4%) Strand=Plus/Minus Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153 |||||| | ||| ||| || ||| | | || ||| |||||||||||| | || Sbjct 1699158 AAAGATATATCACTAGCTGATTCCATGATATCTCTAGGTTCTTGTACTATGAAGTTGAAT 1699099 Query 159154 GCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213 || | |||| |||||||| | |||||| ||||||| ||| | ||||| | Sbjct 1699098 GCTACGGTAGAAATGATGCCTATATCATGGCCTAAGTTTGCAAACATTCATCCGTTCGCC 1699039 Query 159214 CCTAT-GATACAGACCATGGGTTATCAAAAAATT-ATAGATGACTTACAGAAATGGTTAT 159271 || | ||| || | | ||| || || | || || | ||| | |||| || | | Sbjct 1699038 CCCAAAGATCAAGTCAA-GGGATA-CACTGAGTTGATTGTTGAACTCGAGAA--GGATCT 1698983 Query 159272 G--TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGA 159329 | |||||| || || || |||||| | | ||||| ||| ||||| | |||||||| Sbjct 1698982 GGCTGATATTACCGGCTTCCATTCTACTACGCTTCAACCAAACTCAGGAGCTCAGGGTGA 1698923 Query 159330 GTATGCAGGACTGTTAGCAAT--CCAAGCATACCATCAAGGATCAGGAGATGATAAAAGA 159387 || | || || | ||| | ||| || | | | |||||| | | ||| Sbjct 1698922 ATACACTGGCCTTAGTGTAATTGCTAAGTATTT--TGAGAGTAAAGGAGAAGCCCACAGA 1698865 Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447 ||| | ||| || || | || || || || || ||||| |||||||| | ||||| Sbjct 1698864 AATATCGTTTTAATCCCGGTATCTGCTCACGGCACCAATCCCGCATCAGCTGCAATGGCT 1698805 Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTA 159507 || |||| || || |||||||| | ||||| | ||| | | ||||| Sbjct 1698804 GGATTGAAGGTGGTCCCCATCAAGTGTTTGAAAGATGGTTCTTTGGACCTGCAGGATCTG 1698745 Query 159508 GAGAAGAAAGCA----ATCATG--AATACATTTGAACTGTCATGTATTATGATTACATAT 159561 || | |||||| | |||| || | ||||| ||| ||| ||| |||| || Sbjct 1698744 GAAAGCAAAGCATCGAAACATGCCAAGA-ATTTGG-CTGCTATG----ATGGTTACCTAC 1698691 Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGA 159620 || || ||| |||| | |||||| | || | | | || || || |||| | Sbjct 1698690 CCTTCGACATATGGGCTTTTTGAACCTGGTATTATCGATGCCATCAAA-ATCATTCACAA 1698632 Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680 ||||||| || ||||| | |||||||| || | ||||| || || || || || Sbjct 1698631 CCATGGTGGACAAGTATACTTAGATGGTGCTAACATGAATGCTCAAGTGGGATTAACATC 1698572 Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740 ||| | ||| || || ||||||||||||||||| || || ||||| || ||||| Sbjct 1698571 CCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTGCACAAGACTTTTGCCATTCC 1698512 Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || || || ||||| || || || ||||| ||| |||| Sbjct 1698511 TCACGGTGGGGGAGGACCAGGTGTTGGTCCAATTTGTGT 1698473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051119142960