Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 2e-25
>seq3
Length=1828518
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 157882 ATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGAG 157941
|| ||| |||||| || || ||||||| || || || || | || ||| | || |||
Sbjct 1700403 ATCGGTAAAGGATTTTACGGCACCATCATCCCTCCCGTGATTCTTCGTAACTTACTCGAG 1700344
Query 157942 AATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTG 158001
||||| | |||||||||||||||||||| ||||| |||| | ||||||||||||
Sbjct 1700343 AATCCAGGATGGTACACATCTTACACTCCATATCAGCCTGAAGTGAGCCAGGGAAGATTG 1700284
Query 158002 GAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAAC 158061
||| |||||| |||| ||||| |||| | || || ||||| || || | || ||
Sbjct 1700283 GAAAGTTTATTGAATTTTCAAACTGTCATTAGTGATCTGACAGGCCTCCCAGTCGCCAAT 1700224
Query 158062 GCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
|| || || || ||||| | | || || ||||||||||||
Sbjct 1700223 GCTTCCCTTTTGGATGAGTCTTCGGCGGCTGCAGAAGCAATG 1700182
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|||||||||||| ||||| | || || |||||||| |||||||| |||||| |
Sbjct 1699818 CAAAGGTTTGGTGTTCCTTTAGGTTATGGAGGTCCCCATGCTGCTTTCTTTTCTGTTGTT 1699759
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|| | | | |||| || ||||| |||||||| ||| || ||| | |||
Sbjct 1699758 GAGAGCTTGCAACGAAAAATCCCTGGAAGAATTGTTGGTGTCTCGAAGGATCGACTAGGA 1699699
Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622
|| || || | |||||||| |||| || || || |||||||||| |||||| | |||
Sbjct 1699698 AACAACGCTTTGAGATTAGCTTTACAAACCAGGGAACAGCATATCAAAAGAGAAAGAGCC 1699639
Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATAT 158663
|| ||| ||||| |||||||||||| || | || |||||
Sbjct 1699638 ACTTCTAATATCTGTACAGCACAAGCATTGTTAGCCAATAT 1699598
Score = 95.1 bits (104), Expect = 1e-14
Identities = 450/699 (64%), Gaps = 26/699 (4%)
Strand=Plus/Minus
Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153
|||||| | ||| ||| || ||| | | || ||| |||||||||||| | ||
Sbjct 1699158 AAAGATATATCACTAGCTGATTCCATGATATCTCTAGGTTCTTGTACTATGAAGTTGAAT 1699099
Query 159154 GCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213
|| | |||| |||||||| | |||||| ||||||| ||| | ||||| |
Sbjct 1699098 GCTACGGTAGAAATGATGCCTATATCATGGCCTAAGTTTGCAAACATTCATCCGTTCGCC 1699039
Query 159214 CCTAT-GATACAGACCATGGGTTATCAAAAAATT-ATAGATGACTTACAGAAATGGTTAT 159271
|| | ||| || | | ||| || || | || || | ||| | |||| || | |
Sbjct 1699038 CCCAAAGATCAAGTCAA-GGGATA-CACTGAGTTGATTGTTGAACTCGAGAA--GGATCT 1698983
Query 159272 G--TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGA 159329
| |||||| || || || |||||| | | ||||| ||| ||||| | ||||||||
Sbjct 1698982 GGCTGATATTACCGGCTTCCATTCTACTACGCTTCAACCAAACTCAGGAGCTCAGGGTGA 1698923
Query 159330 GTATGCAGGACTGTTAGCAAT--CCAAGCATACCATCAAGGATCAGGAGATGATAAAAGA 159387
|| | || || | ||| | ||| || | | | |||||| | | |||
Sbjct 1698922 ATACACTGGCCTTAGTGTAATTGCTAAGTATTT--TGAGAGTAAAGGAGAAGCCCACAGA 1698865
Query 159388 AATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCA 159447
||| | ||| || || | || || || || || ||||| |||||||| | |||||
Sbjct 1698864 AATATCGTTTTAATCCCGGTATCTGCTCACGGCACCAATCCCGCATCAGCTGCAATGGCT 1698805
Query 159448 GGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTA 159507
|| |||| || || |||||||| | ||||| | ||| | | |||||
Sbjct 1698804 GGATTGAAGGTGGTCCCCATCAAGTGTTTGAAAGATGGTTCTTTGGACCTGCAGGATCTG 1698745
Query 159508 GAGAAGAAAGCA----ATCATG--AATACATTTGAACTGTCATGTATTATGATTACATAT 159561
|| | |||||| | |||| || | ||||| ||| ||| ||| |||| ||
Sbjct 1698744 GAAAGCAAAGCATCGAAACATGCCAAGA-ATTTGG-CTGCTATG----ATGGTTACCTAC 1698691
Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGA 159620
|| || ||| |||| | |||||| | || | | | || || || |||| |
Sbjct 1698690 CCTTCGACATATGGGCTTTTTGAACCTGGTATTATCGATGCCATCAAA-ATCATTCACAA 1698632
Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680
||||||| || ||||| | |||||||| || | ||||| || || || || ||
Sbjct 1698631 CCATGGTGGACAAGTATACTTAGATGGTGCTAACATGAATGCTCAAGTGGGATTAACATC 1698572
Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740
||| | ||| || || ||||||||||||||||| || || ||||| || |||||
Sbjct 1698571 CCCAGGAGACCTGGGAGCTGATGTATGTCATCTAAATTTGCACAAGACTTTTGCCATTCC 1698512
Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|| || || ||||| || || || ||||| ||| ||||
Sbjct 1698511 TCACGGTGGGGGAGGACCAGGTGTTGGTCCAATTTGTGT 1698473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051119142960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |