Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4 178 3e-39
seq2 167 5e-36
>seq4
Length=1577441
Score = 178 bits (196), Expect = 3e-39
Identities = 169/216 (78%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
||| ||||| | |||||||||||| || |||||||| || || || | ||||||||| ||
Sbjct 1239718 TCTTAAAACTAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGAGTTCTGCC 1239777
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
||||| | ||||||||||| ||||| | ||||| || || |||||||| ||||| ||
Sbjct 1239778 GTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGAATACCTTCCTT 1239837
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
||| ||||| || ||||||||| ||||||||||| || ||||| || |||||||
Sbjct 1239838 GTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACCTCGAGGGTAAT 1239897
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || || || || || ||||| | ||||||
Sbjct 1239898 AGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 1239933
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||| || | |||||||||||| || |||||||| || || || | ||||||
Sbjct 1239940 TCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGAGT 1239999
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||||||||||| ||||| | ||||| || || |||||||| ||
Sbjct 1240000 TCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGAATACC 1240059
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| ||||| || ||||||||| ||||||||||| || ||||| || ||
Sbjct 1240060 TTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACCTCGAG 1240119
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || || || || ||||| | ||||||
Sbjct 1240120 GGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 1240161
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||| || | |||||||||||| || |||||||| || || || | ||||||
Sbjct 1240168 TCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGAGT 1240227
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||||||||||| ||||| | ||||| || || |||||||| ||
Sbjct 1240228 TCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGAATACC 1240287
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| ||||| || ||||||||| ||||||||||| || ||||| || ||
Sbjct 1240288 TTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACCTCGAG 1240347
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| ||||| || || || || || ||||| | ||||||
Sbjct 1240348 GGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 1240389
Score = 170 bits (188), Expect = 4e-37
Identities = 172/224 (77%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||| || | |||||||||||| || |||||||| || || || | ||||||
Sbjct 1240396 TCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAAAGAGT 1240455
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||||||||||| ||||| | ||||| || || |||||||| ||
Sbjct 1240456 TCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGAATACC 1240515
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| ||||| || ||||||||| ||||||||||| || ||||| |||||
Sbjct 1240516 TTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACCTCAAG 1240575
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| | ||||| ||||| | ||||| || || | |||||||
Sbjct 1240576 AGTGATAGTCTTACCTGTTAGGGTTTTCACAAAAATCTGCATTT 1240619
>seq2
Length=2687137
Score = 167 bits (184), Expect = 5e-36
Identities = 179/236 (76%), Gaps = 3/236 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||| ||| ||||| | ||| ||||| || || || ||||| |||| |||||
Sbjct 1169899 TCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 1169958
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | |||||||| || || || | ||||||||||| |||||||| ||
Sbjct 1169959 TCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGAGGAATTCC 1170018
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||||||||| || ||||||||| || |||||||| || || ||||| |
Sbjct 1170019 TTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACTTCCAA 1170078
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATG---GTTACT 195151
||||| ||||| || || || || || ||||| | ||||||| || ||||||
Sbjct 1170079 GGTAATGGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTTTGTCTGTTACT 1170134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481443632437
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |