Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 264 9e-65 seq4 168 5e-36 seq3 147 2e-29 >seq1 Length=3325186 Score = 264 bits (292), Expect = 9e-65 Identities = 498/725 (69%), Gaps = 12/725 (2%) Strand=Plus/Plus Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 ||||||| ||||| || | || || || || | || ||| | | |||||| | |||| Sbjct 474073 TAAGAACCGCTTGTGAGCGTGCAAAGAGAACTTTGTCCTCTTCTGCACAAACCTCCATTG 474132 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 | | ||||| || || ||||| ||||| | | || | || | || || | ||| | Sbjct 474133 AGATTGATTCTTTGTTCGAGGGTATTGACTTCTACACTTCGATCACTAGAGCTAGATTCG 474192 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 | || ||||| | ||||| || ||| || || || || || || ||| |||| || Sbjct 474193 AGGAGCTTTGTGCCGATCTGTTCAGATCCACTATCGAGCCCGTTGAGAGAGTCTTAAAAG 474252 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 | || ||| | || || || |||| ||||| ||||| | |||||||| || || |||| Sbjct 474253 ACTCCAAGTTAGACAAGTCTCAAGTTCATGAGATTGTTTTGGTTGGTGGTTCGACCAGAA 474312 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTCTTA---TTTCAATGGTAAAAAATTAAATGAAA 552204 |||| ||| || ||||| || |||| | |||||||||||| | ||| || Sbjct 474313 TTCC-AAAGGTCCAGAAAT--TAGTTTCTGACTTTTTCAATGGTAAGGAGCCAAAC--AA 474367 Query 552205 GTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 || | || ||||||||||| ||||| || ||||| || | ||||||||||| | || Sbjct 474368 GTCAATCAACCCAGATGAGGCCGTTGCATACGGTGCTGCTGTACAAGCAGCTATATTGTC 474427 Query 552263 TGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 |||| | || | | || ||| ||| | | || | |||||||| ||||||||||| Sbjct 474428 TGGAGATACCTCTTCCAAGACT-CAAGACTTGCTATTGCTAGATGTTGCTCCTCTATCTT 474486 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| | || || | ||| ||||| |||||||| || ||| ||||| |||| |||| Sbjct 474487 TGGGTATTGAGACCGCTGGTGGTATCATGACTAAGCTGATCCCAAGAAACTCTACGATTC 474546 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | || || || | ||||| || ||| | || || ||| | | |||| |||| Sbjct 474547 CAGCCAAGAAGTCGGAAATTTTTTCGACATATGCTGACAACCAACCAGGTGTTTTGATTC 474606 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || |||| ||||| ||||||| || || || || || | | |||| ||| | Sbjct 474607 AAGTTTTCGAAGGTGAAAGAACTAGAACCAAGGACAACAACCTGTTGGGTAAGTTTGAAC 474666 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 | ||||||||||| ||||| | || || || |||||||| || |||||||| || | Sbjct 474667 TTTCTGGTATTCCTCCAGCTCCAAGAGGTGTTCCTCAAATTGAGGTCACTTTCGACATGG 474726 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATA 552621 |||||||||| || |||||||| |||| ||| || || |||| | |||| | Sbjct 474727 ATGCCAATGGTATCTTGAATGTTTTTGCTGTTGAAAAGGGTACTGGTAAGACTCAAAAGA 474786 Query 552622 TTACT 552626 ||||| Sbjct 474787 TTACT 474791 Score = 181 bits (200), Expect = 9e-40 Identities = 376/550 (68%), Gaps = 16/550 (3%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGT-TTGGCAAAATGGTAAAGT 550053 || || || ||||| || |||||||| |||||| | || || || || | || Sbjct 473298 ATTGGAATTGATTTGGGTACCACATACTCTTGTGTGGCACACTTTGCTAA-TGATCGTGT 473356 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 ||| || || || || || ||||||||||| || |||||||| | ||| | || || || Sbjct 473357 TGAGATCATAGCTAACGACCAAGGTAACAGGACGACTCCATCGTTCGTTGCCTTTACCGA 473416 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 |||||| || |||| ||||||||||| | ||||| | ||||| | ||||| Sbjct 473417 CACTGAAAGATTGATTGGAGATGCAGCAAAGAACCAAGCTGCCATGAATCCAGCTAATAC 473476 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | | || ||||| |||||||| || || || | || | || | |||||| || Sbjct 473477 TGTATTCGATGCCAAACGTTTGATCGGTAGGAAATTCGACGACCCTGAAACTCAGGCCGA 473536 Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-CTA 550292 ||| ||||| | |||||| || || | | |||||| ||| |||| | | | | Sbjct 473537 TATTAAGCACTTCCCTTTCAAAGTTATCGACAAGGGTGGAAAGCCTAATATCCAGGTCGA 473596 Query 550293 CTCATGAAGGATCTGTTAAACAA---TTTTCA--CCAGAACAAATTTCATCTATGGTTTT 550347 | | |||| || | || | |||||| || ||| | ||||| |||||||| | Sbjct 473597 AT--TCAAGG----GTGAGACTAAGGTTTTCAGCCCTGAAGAGATTTCCTCTATGGTCCT 473650 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAA 550406 || |||||||| | || || | || | |||| ||||| | | |||||||| Sbjct 473651 AACAAAAATGAAGGATACTGCT-GAGCAGTATTTGGGTGAGAAGATCAACGATGCAGTTG 473709 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | ||||| || || || || ||||| || ||| | ||||| ||||| |||||||| | | Sbjct 473710 TTACTGTTCCTGCTTACTTCAATGATTCTCAAAGGCAAGCCACTAAGGATGCTGGTCTAA 473769 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | || |||| | ||||||||||| || |||||||||||| |||| || | Sbjct 473770 TTGCTGGTTTGAACGTTCAAAGAATTATCAATGAGCCAACTGCTGCTGCAATTGCCTACG 473829 Query 550527 GACTTGATAA 550536 || | || || Sbjct 473830 GATTGGACAA 473839 Score = 120 bits (132), Expect = 2e-21 Identities = 258/385 (67%), Gaps = 12/385 (3%) Strand=Plus/Minus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 |||||| ||||||||||| ||||| |||||| || ||||||| || |||| ||||| Sbjct 725594 TGTTAACCCAGATGAGGCCGTTGCAATTGGTGCTGCCATTCAAGGTGCCGTTCTGTCTGG 725535 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 | | | | || || | ||| ||| ||||| ||||||||||| || || Sbjct 725534 AGA----GGTCAAGGACGTCC------TGTTGTTG--GATGTCACTCCTCTATCCCTGGG 725487 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | || || | || ||| || | |||| || ||| ||||| ||||||||||| Sbjct 725486 TATTGAGACCCTGGGTGGTGTTTTCACTAGACTGATCCCAAGAAACACTACTATTCCAAC 725427 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || ||||||| ||||| || || |||| | |||||| | ||| ||| | | Sbjct 725426 CAAGAAATCTCAAGTATTCTCCACTGCTTCATCTGGTCAAACCTCCGTTGAAATCAGAGT 725367 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 ||| |||| || ||| | || || || || | |||| || | ||| | Sbjct 725366 TTTCCAAGGTGAGAGAGAGTTGGTACGTGACAACAAGTTGATCGGTAACTTCACTTTGGC 725307 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 |||||||| |||||||| || || || || ||||| ||||| |||||||| || || Sbjct 725306 TGGTATTCCACCTGCTCCAAAGGGTGTTCCTCAGATTGAGGTTACCTTCGATATTGACGC 725247 Query 552566 CAATGGAATTTTGAATGTGACTGCT 552590 | |||| || | ||||| ||||| Sbjct 725246 CGATGGTATCATCAATGTTTCTGCT 725222 >seq4 Length=1577441 Score = 168 bits (186), Expect = 5e-36 Identities = 455/689 (66%), Gaps = 18/689 (3%) Strand=Plus/Plus Query 551910 AGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAA 551969 ||||| || || || | || || || || | || ||| | |||||||| | ||||| Sbjct 866738 AGAACCGCATGTGAGCGTGCTAAGAGAACTTTGTCTTCTTCTGCTCAAACCTCCATTGAG 866797 Query 551970 GTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAA 552029 | || || || || || || |||| | | || || | | || |||| ||| || Sbjct 866798 ATCGACTCTTTGTTCGAAGGTGTTGACTTCTACACTTCTTTGACCAGAGCCAGATTCGAG 866857 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGAT 552089 || | ||| ||| || || ||| || ||||| || || || | ||||| | || Sbjct 866858 GAACTGTGTGGTGACCTATTCAGATCCACCATTGAGCCTGTTGAGAAGGTTTTGAAGGAC 866917 Query 552090 TCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATT 552149 | ||| | || || || |||| | || ||||| | |||||||| ||||| |||||| Sbjct 866918 GCTAAGTTGGACAAGTCTCAAGTTAACGAGATTGTCTTGGTTGGTGGTTCTACCAGAATT 866977 Query 552150 CCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAAAGT 552206 || || | | ||| ||| ||| | ||| || ||||| | ||| | | Sbjct 866978 CCAAAGGTCC---AAAAGTTGGTCTCTGACTTCTTCAACGGTAAGGAGCCAAACAGATCT 867034 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 | || |||||||||||||||||||| |||||||| ||||||||||||| |||||||| Sbjct 867035 ATCAACCCAGATGAGGCTGTTGCCTACGGTGCCGCTGTTCAAGCAGCTATCCTTTCTGGT 867094 Query 552267 CAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 | || | || || ||| ||| || | | || | |||||| ||||||| || || || Sbjct 867095 GACACTTCATCCAAGACT-CAAGATCTGTTGCTGTTGGATGTTGCTCCTCTGTCCCTGGG 867153 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | || || | ||| ||||| ||||| || || ||| ||||| |||| || || Sbjct 867154 TATTGAGACTGCTGGTGGTATCATGACCAAGCTGATCCCAAGAAACTCTACCATCCCAAC 867213 Query 552386 TAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 || || || || | ||| || || || | || || ||| | | ||| ||||| Sbjct 867214 CAAGAAGTC-CGAGACTTTCTCCACTTACGCTGACAACCAACCAGGTGTGTTGATTCAGG 867272 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAAT 552500 | | || || || ||| ||| || || |||||| |||| || | Sbjct 867273 TCTACGAGGGTGAGAGAGCCAAGACTGCCGACAA----CAACTTGTTGGGTAAGTTCGAG 867328 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 | ||||||||||| ||||| | || || || || ||||| || || ||||| || Sbjct 867329 CTGTCTGGTATTCCTCCAGCTCCAAGAGGTGTTCCTCAGATTGAGGTCACCTTCGACATG 867388 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGC 552589 ||||||||||| || ||||| || |||| Sbjct 867389 GATGCCAATGGTATCTTGAACGTCTCTGC 867417 Score = 158 bits (174), Expect = 1e-32 Identities = 182/245 (74%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 368611 TGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGT 368670 ||||| || || |||||| ||||| ||||| ||| ||||||||| || ||||| ||| Sbjct 1149610 TGGGGTACCCCTATTCCATTATGGGTTTCTGACGATTTTGAAGAAATCGTGTGTATCGGT 1149669 Query 368671 TCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGAT 368730 |||||| |||||||| |||| |||| ||| ||| |||| | ||| | || ||| Sbjct 1149670 TCAATTCAAGAATTGAGAGAACTATCGGGTAACCAAGATATCACTGACATTCACCGTGAG 1149729 Query 368731 AAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTTATTGTCTCGAGTTGAA 368790 || ||||||||||| | ||||| || || |||| || ||| | || || | ||| Sbjct 1149730 AAGATTGATCACATCACTATTCCTTCTAAACAAGGCAAGGGTGTGTTAAGGAGAATCGAA 1149789 Query 368791 GGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCA 368850 | ||| || ||||| |||||||| |||||||| |||||||| | ||||| || ||||| Sbjct 1149790 GAAGTGTTTGATTGTTGGTTTGAGTCAGGTTCCATGCCTTACGCTCAAAACCACTATCCT 1149849 Query 368851 TTTGA 368855 || || Sbjct 1149850 TTCGA 1149854 Score = 147 bits (162), Expect = 2e-29 Identities = 371/549 (68%), Gaps = 24/549 (4%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTG-TTTGGCAAAATGGTA 550049 |||| | ||||| ||||||||||||||||| ||||| | ||| || || || | Sbjct 865963 AGCTGTCGGTATTGATTTAGGAACCACATACTCATGTGTGGCACATTTCGCCAA-TGATC 866021 Query 550050 AAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCA 550109 ||||| || ||||| ||||| || |||||||||||||| ||||| | || |||||| Sbjct 866022 GTGTTGAGATCATTGCAAATGACCAGGGTAACAGAACTACCCCATCATTCGTCGCTTTCA 866081 Query 550110 CGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 | || || || | | | | |||||||||| || || | ||||| || || || || Sbjct 866082 CTGACACCGAGAGACTCA-TTGGTGATGCTGCTAAGAACCAAGCTGCTATGAACCCAGCC 866140 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTT---AATGATTCGACTGTT 550225 || || |||| || || || ||| | || || |||| ||| ||| | ||| Sbjct 866141 AACACCGTTTTCGACGCCAAGCGTCTGATCGGTAGAAAATTTTCAGATGCTGAGAC---C 866197 Query 550226 CAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATT 550285 || || ||||| ||||| | || ||| | | ||| | |||||| || | ||| Sbjct 866198 CAAGCCGATATCAAGCACTTCCCATTCAAGGTCGTTGACAAGGGTGGAAAGCCAAACATT 866257 Query 550286 GAAGCT--ACTCATGAAGGATCTGTTAAACAA--TTTTCA--CCAGAACAAATTTCATCT 550339 | | | | ||| |||| || | ||| | |||| |||||| | || ||||| Sbjct 866258 CAGGTTGAATTCA--AAGG---TG-AGACCAAGGTCTTCACCCCAGAAGAGATCTCATCC 866311 Query 550340 ATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC-TTTTGTTGGTCAAGAAGTTACGGA 550398 |||||||| | || ||||| | || | | | || || ||||| | |||| | || Sbjct 866312 ATGGTTTTGACCAAGATGAAGGACACTG-CTGAGCAATTCCTTGGTGACAAAGTCAACGA 866370 Query 550399 TGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGC 550458 ||| || | ||||| ||||| || || || ||||| || | || || ||||| ||||| Sbjct 866371 TGCCGTTGTCACTGTCCCAGCTTACTTCAACGACTCTCAGAGACAGGCCACTAAGGATGC 866430 Query 550459 TGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACT 550518 ||| | ||||| || | || ||| | | || ||||| || || ||||||||||| | Sbjct 866431 TGGTCTGATTGCCGGTTTGAACGTTATGAGAATCATCAACGAGCCAACTGCTGCTGCCAT 866490 Query 550519 TGCATATGG 550527 ||| || || Sbjct 866491 TGCTTACGG 866499 Score = 91.5 bits (100), Expect = 1e-12 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | ||| || || |||| |||||||| ||||| | ||| || || |||| Sbjct 1240426 TTCCTTTTG-AATGTTATAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAA 1240484 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | | |||||||||||||||||| ||||| || || ||||| || || || Sbjct 1240485 AGATTAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGT 1240544 Query 563402 CCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 ||||| || || | ||| | || || ||||| | ||| ||||| || || ||||| Sbjct 1240545 TGTCAATGGTGTCTG-ATGACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTC 1240603 Query 563461 ACGAAAATTTGCAT 563474 || ||||| ||||| Sbjct 1240604 ACAAAAATCTGCAT 1240617 Score = 89.7 bits (98), Expect = 4e-12 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | ||| || || |||| |||||||| ||||| | ||| || || |||| Sbjct 1239742 TTCCTTTTG-AATGTTATAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAA 1239800 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | | |||||||||||||||||| ||||| || || ||||| || || || Sbjct 1239801 AGATTAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGT 1239860 Query 563402 CCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 ||||| || || | ||| | || ||||| |||| ||| || || || | || || Sbjct 1239861 TGTCAATGGTGTCTG-ATGACTCCACCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTG 1239919 Query 563461 ACGAAAATTTGCATA 563475 ||||| ||||||||| Sbjct 1239920 ACGAAGATTTGCATA 1239934 Score = 89.7 bits (98), Expect = 4e-12 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | ||| || || |||| |||||||| ||||| | ||| || || |||| Sbjct 1239970 TTCCTTTTG-AATGTTATAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAA 1240028 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | | |||||||||||||||||| ||||| || || ||||| || || || Sbjct 1240029 AGATTAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGT 1240088 Query 563402 CCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 ||||| || || | ||| | || ||||| |||| ||| || || || | || || Sbjct 1240089 TGTCAATGGTGTCTG-ATGACTCCACCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTG 1240147 Query 563461 ACGAAAATTTGCATA 563475 ||||| ||||||||| Sbjct 1240148 ACGAAGATTTGCATA 1240162 Score = 89.7 bits (98), Expect = 4e-12 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | ||| || || |||| |||||||| ||||| | ||| || || |||| Sbjct 1240198 TTCCTTTTG-AATGTTATAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAA 1240256 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | | |||||||||||||||||| ||||| || || ||||| || || || Sbjct 1240257 AGATTAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGT 1240316 Query 563402 CCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTA 563460 ||||| || || | ||| | || ||||| |||| ||| || || || | || || Sbjct 1240317 TGTCAATGGTGTCTG-ATGACTCCACCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTG 1240375 Query 563461 ACGAAAATTTGCATA 563475 ||||| ||||||||| Sbjct 1240376 ACGAAGATTTGCATA 1240390 >seq3 Length=1828518 Score = 147 bits (162), Expect = 2e-29 Identities = 363/548 (66%), Gaps = 17/548 (3%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| ||||| |||||||| ||||| ||| ||||||| | || | | | Sbjct 854209 GCTATTGGTATCGATTTAGGTACCACCTATTCATGTGTTGCTACTTACGACTCCGC---A 854153 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || |||||||| || ||||||||| | |||||| || | ||| ||||||| Sbjct 854152 GTGGAGATCATTGCCAACGAGCAAGGTAACCGTGTTACTCCTTCCTTCGTTGCTTTCACT 854093 Query 550112 GAAACTGAACAT---TTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACC 550168 ||||| | || | ||||| || || || | || || || || || | Sbjct 854092 C---CTGAAGAGAGATTGATCGGTGACGCTGCTAAGAACCAGGCTGCTTTGAACCCAAAG 854036 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| |||| || ||||| ||||| ||||| ||| || | ||| | |||| || Sbjct 854035 AACACTGTTTTCGACGCTAAGCGTTTGATTGGTAGAGCCTTCGACGATGAGTCTGTCCAA 853976 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 ||| || ||| |||||| ||| | |||| || | || || || | ||||| Sbjct 853975 AAAGACATCAAGTCTTGGCCATTCAAGGTTGTCAACGACAACGGTAACCCATTGATTGAG 853916 Query 550289 GC----TACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGT 550344 | |||| | | || | || |||||||| || || |||| || || ||||| Sbjct 853915 GTCGAGTACTTAGGTGAGACC----AAGCAATTTTCTCCTCAAGAAATCTCCTCCATGGT 853860 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| | || ||||| | || ||| | |||||| | || | | || || Sbjct 853859 TTTGACCAAGATGAAGGAGGTCGCTGAGGCTAAGATCGGTCAAAAGGTCGAGAAGGCTGT 853800 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | || || ||||| || || || ||| | ||| | |||||||||||||||||||| Sbjct 853799 TGTCACCGTCCCAGCTTACTTCAACGACGCTCAAAGACAAGCTACTAAAGATGCTGGTGC 853740 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||| ||||||| || ||| | ||||| ||||| ||||||||||| || || |||| || Sbjct 853739 CATTTCTGGACTGAACGTTTTGCGTATCATCAACGAACCTACTGCAGCCGCCATTGCTTA 853680 Query 550525 TGGACTTG 550532 ||| |||| Sbjct 853679 TGGTCTTG 853672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295418270390