Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2 161 1e-34 >seq2 Length=2687137 Score = 161 bits (178), Expect = 1e-34 Identities = 298/437 (68%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 || || ||||| || ||||| ||||||||||| | || | ||||| || ||||| Sbjct 443004 AAGCAAGCAAAGTCGGTGTGTAATCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTC 443063 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292 || |||||||| | |||||| ||||| | ||| || || | || ||||| || |||||| Sbjct 443064 AAACCTGGCATAAGACCTCTCTTTTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAG 443123 Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352 || ||||||||||| || || || || || | |||| | |||| | | | ||| Sbjct 443124 AAGATACCTTCAACAGCAGCGAAGGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCG 443183 Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412 | ||||||| | | | ||| || |||||| ||| | |||| ||| || || || || Sbjct 443184 GCAATCCATCTCATGGCCCAGTCAGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCA 443243 Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472 || || | || | ||||| |||| | || ||||||||||| | || || Sbjct 443244 TTGAACAAGAATTCGGATTCTTTTGGATCTTTGATGTAAGTATCAATCAACAATGAGTAA 443303 Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532 |||| ||||| || || || || || |||||||| |||||||| | ||||| | Sbjct 443304 GTTTCGGAGTGGATGTTCTCCATCATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGA 443363 Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 | |||||| || || | | | || |||||||| || || |||||| || Sbjct 443364 AGTTGAACCTCAGCGCTGAAGTTTTCCACCAAATTTTCATTGACAATACCATCAGAGGCA 443423 Query 37593 GCAAAGAAAGCAAGAAC 37609 ||||| || |||||||| Sbjct 443424 GCAAAAAAGGCAAGAAC 443440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316718556440