Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 2e-17
seq4 98.7 8e-16
seq2 86.0 5e-12
>seq3
Length=1828518
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| ||||| || ||||| ||||| | | ||| | | || ||||| |||||||| |||||
Sbjct 868927 CTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAA 868868
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
||||| |||||||| || | |||| ||||||||||| |||||| || ||
Sbjct 868867 GATCAGACGCTGTTGGTCAGGAGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 868808
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | || || || | ||||||||||| || || || || || || | || |||||
Sbjct 868807 GTCAATAGTGTCGGAAGACTCCACCTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTAC 868748
Query 48755 AAAAATCTGCAT 48766
||||| |||||
Sbjct 868747 GAAAATTTGCAT 868736
>seq4
Length=1577441
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || |||| | || ||||| || || ||| || |||||||| || || |||||
Sbjct 1240391 CCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTATAGTCAGAA 1240450
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| ||| |||| ||||| |||||||| ||||| || | || || ||||| | |||
Sbjct 1240451 AGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGATCAGGAGGA 1240510
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| || |||||||| |||||| || || | | | ||||| | |||||||
Sbjct 1240511 ATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGATGACTCCACC 1240570
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | || || || || || || | ||||| ||||||||||||||
Sbjct 1240571 TCAAGAGTGATAGTCTTACCTGTTAGGGTTTTCACAAAAATCTGCAT 1240617
>seq2
Length=2687137
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || ||||| || || ||| ||| | |||| ||||| |||||||| |||||
Sbjct 1169929 CTCCTTCTGGATGTTGTAGTCGGACAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAA 1169988
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| || ||||| || | |||| || |||||||| |||||| || ||
Sbjct 1169989 AATCAAACGTTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTT 1170048
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || | ||| || |||| ||||| || || || || || || || ||
Sbjct 1170049 GTCGATGGTGTCGGAGGACTCGACTTCCAAGGTAATGGTCTTACCGGTTAAGGTCTTGAC 1170108
Query 48755 AAAAATCTGCAT 48766
|||||||||||
Sbjct 1170109 GAAAATCTGCAT 1170120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937548930553
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |