Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 161 2e-34 >seq2 Length=2687137 Score = 161 bits (178), Expect = 2e-34 Identities = 548/847 (65%), Gaps = 10/847 (1%) Strand=Plus/Plus Query 47852 ACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAG 47911 ||||| || || |||||||| ||||| || |||| || |||||||||||||| || Sbjct 442731 ACTCTCTTTTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTCTCCATGAAATCAAAT 442790 Query 47912 GGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACG 47971 || |||| ||| ||||| | | ||||| | |||| || ||| || ||| Sbjct 442791 GGATTGGTGACGTTGTACACTTTTTTGTTGCCCAGAGCTACCAGTAGTCTATCAGCAACG 442850 Query 47972 TACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCC 48031 |||| | || | |||| | | || |||||| || | | ||| || || | ||| Sbjct 442851 AACTCAACATACTGGCACATCAAGCTGCAGTTCATTCCCAGCAAGGAAACAGGAAGAGCA 442910 Query 48032 TTTGTG-AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGA 48090 | |||| || | || || || |||| || || || | ||||| | |||| Sbjct 442911 TCTGTGAAGTATCT-TTTTTCAATCTCGACAGCCTCTGTAATAATCTTTTCAACGATTTC 442969 Query 48091 CTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 ||| || | ||||| || ||| | | |||| ||| |||||||| |||| || Sbjct 442970 CTCACTGGCTCTGTTGTTCAAGTG---AGAGAATAGCAAGCAAGCAAAGTCGGTGTGTAA 443026 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 ||||| || | || || ||| | ||||||||| | ||| ||||| | || |||| Sbjct 443027 TCCTTCATCTCTGCAAATAAGCTCATTGGAGAAGGTCAAACCTGGCATAAGACCTCTCTT 443086 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 ||| | |||||| || | ||||||||||| || |||||||| || || || || ||||| Sbjct 443087 TTTCAACCAGAAGATAGAAGCGAAAGAGCCCGAAAAGAAGATACCTTCAACAGCAGCGAA 443146 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 || | | || |||| |||| | | || | ||||| | |||||||| Sbjct 443147 GGCAACCAAACGTTCAGCGAACAAAGCATCGTCATCGGCAATCCATCTCATGGCCCAGTC 443206 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACC 48390 ||||| | ||||| ||||| || ||||| ||||| ||| | | | | || Sbjct 443207 AGCCTTTTCTTTGATACATGGAATGGTCTCGATGGCATTGAACAAGAATTCGGATTCTTT 443266 Query 48391 TGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTAT 48450 || || | || ||| | || | || ||| | || ||||| | ||||| || Sbjct 443267 TGGATCTTTGATGTAAGTATCAATCAACAATGAGTAAGTTTCGGAGTGGATGTTCTCCAT 443326 Query 48451 AGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCT 48510 ||| || || ||||| || | || || | || || || | | ||| | Sbjct 443327 CATGATTTGAAAACCGTAAAAACATTTTGCTTCGGGAAGTTGAACCTCAGCGCTGAAGTT 443386 Query 48511 CTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTT 48570 |||| || ||| |||||||| || ||||| || |||||||| |||||||| || | | Sbjct 443387 TTCCACCAAATTTTCATTGACAATACCATCAGAGGCAGCAAAAAAGGCAAGAAC-TCTAG 443445 Query 48571 A-AGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | | |||| ||| |||| | | | || ||||||| | || | || || |||| Sbjct 443446 AGATAAAATACTTCTCATTGTCGTTCATACGATTATTCCAGTCATGCAAATCCTTTCCCA 443505 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATGT 48686 ||| | ||| || ||||||| ||||| || || | ||||||||| ||| |||| Sbjct 443506 AGTCTATTTCCTCGGCAGTCCAAAAGGAAGCTTCGGCCTGTTTGTACATTTGCCAGATGT 443565 Query 48687 CCGGATA 48693 | |||| Sbjct 443566 CGTGATA 443572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532671914240