Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 1e-22
>seq3
Length=1828518
Score = 122 bits (134), Expect = 1e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
|||||| ||||| || || | | ||||| || || || || || || | ||| | ||
Sbjct 1700182 CATTGCTTCTGCAGCCGCCGAAGACTCATCCAAAAGGGAAGCATTGGCGACTGGGAGGCC 1700241
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||| || || | |||| ||||| |||| |||||| ||||||||||||||| |
Sbjct 1700242 TGTCAGATCACTAATGACAGTTTGAAAATTCAATAAACTTTCCAATCTTCCCTGGCTCAC 1700301
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|||| ||||| |||||||||||||||||||| | |||||||| || | ||| || |
Sbjct 1700302 TTCAGGCTGATATGGAGTGTAAGATGTGTACCATCCTGGATTCTCGAGTAAGTTACGAAG 1700361
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080
|| || || || | ||||| || || |||||| ||| ||
Sbjct 1700362 AATCACGGGAGGGATGATGGTGCCGTAAAATCCTTTACCGAT 1700403
Score = 100 bits (110), Expect = 3e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||| ||| ||||| || || || ||||| || || || ||||| || ||||| ||
Sbjct 1698473 ACACAAATTGGACCAACACCTGGTCCTCCCCCACCGTGAGGAATGGCAAAAGTCTTGTGC 1698532
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
|||||||||||||||||||| || || ||| | ||| || || || || || |||
Sbjct 1698533 AAATTTAGATGACATACATCAGCTCCCAGGTCTCCTGGGGATGTTAATCCCACTTGAGCA 1698592
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTT 138355
|| | || |||||||| | ||||| || ||||||| || |||| ||| ||
Sbjct 1698593 TTCATGTTAGCACCATCTAAGTATACTTGTCCACCATGGTTGTGAATGATTTT 1698645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998320387720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |