Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 122 1e-22 >seq3 Length=1828518 Score = 122 bits (134), Expect = 1e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| ||||| || || | | ||||| || || || || || || | ||| | || Sbjct 1700182 CATTGCTTCTGCAGCCGCCGAAGACTCATCCAAAAGGGAAGCATTGGCGACTGGGAGGCC 1700241 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| || || | |||| ||||| |||| |||||| ||||||||||||||| | Sbjct 1700242 TGTCAGATCACTAATGACAGTTTGAAAATTCAATAAACTTTCCAATCTTCCCTGGCTCAC 1700301 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 |||| ||||| |||||||||||||||||||| | |||||||| || | ||| || | Sbjct 1700302 TTCAGGCTGATATGGAGTGTAAGATGTGTACCATCCTGGATTCTCGAGTAAGTTACGAAG 1700361 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTAT 140080 || || || || | ||||| || || |||||| ||| || Sbjct 1700362 AATCACGGGAGGGATGATGGTGCCGTAAAATCCTTTACCGAT 1700403 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| ||| ||||| || || || ||||| || || || ||||| || ||||| || Sbjct 1698473 ACACAAATTGGACCAACACCTGGTCCTCCCCCACCGTGAGGAATGGCAAAAGTCTTGTGC 1698532 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 |||||||||||||||||||| || || ||| | ||| || || || || || ||| Sbjct 1698533 AAATTTAGATGACATACATCAGCTCCCAGGTCTCCTGGGGATGTTAATCCCACTTGAGCA 1698592 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTT 138355 || | || |||||||| | ||||| || ||||||| || |||| ||| || Sbjct 1698593 TTCATGTTAGCACCATCTAAGTATACTTGTCCACCATGGTTGTGAATGATTTT 1698645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998320387720