Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 230 3e-55
seq2 95.1 1e-14
>seq1
Length=3325186
Score = 230 bits (254), Expect = 3e-55
Identities = 891/1387 (64%), Gaps = 41/1387 (3%)
Strand=Plus/Plus
Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286
||||| ||||| ||||| || || || || ||||||| || | || || ||| ||
Sbjct 2235353 ATGCGTGTCGCTATCGGTATTCATGGTGATGACATTGCAAGGGTTATTGAAACCTACAAC 2235412
Query 75287 AAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345
||| || | |||| |||| |||||| | || || || || || |||||||| ||
Sbjct 2235413 TTTATGAGTCAGAAGTAT-TTCACTCACGCCTCTCCTACTCTGTTTAACGCTGGTACCCC 2235471
Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405
|| || ||||| || ||| | | |||| ||| ||||| || | |||||
Sbjct 2235472 TCACCCACAAATGTCGTCATGTTTCTTAGTTGCCATGCGGGATGACTCGATTGAAGGTAT 2235531
Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465
|||| ||| | | ||| ||||| ||| || || ||||| || ||||| ||||
Sbjct 2235532 TTATGATACTTTGAAGGAATGTGCTTTAATTTCCAAAACTGCTGGTGGAATTGGTTTGCA 2235591
Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525
||| ||| || | | |||| ||| ||| || || || ||| || | ||
Sbjct 2235592 CATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACTTCGAACGG 2235651
Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585
||||||||||||| | | || || ||| ||| || || ||||| ||||| || |
Sbjct 2235652 TATTATTCCAATGGTGAGAGTTTTCAACAACACCGCTCGTTATGTTGATCAA---GGTGG 2235708
Query 75586 TCGCAAG-----GGGTCCA-TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639
| |||| ||| || | || | |||||||||||||||||||| || ||| | |
Sbjct 2235709 TAACAAGCGCCCTGGTGCATTTGCTTTGTACTTGGAACCATGGCATGCGGACATCTTCGC 2235768
Query 75640 GTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTT 75698
|| |||| | || ||||| || | || || || | | |||||||| ||
Sbjct 2235769 CTTTATTGACATTCGTAAGAACCATGGAAAAGAGGA-AATCAGAGCCAGAGATCTATTCC 2235827
Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758
| | || ||||| || || || |||||||| |||| || || ||| ||||| | |
Sbjct 2235828 CGGCTCTATGGATCCCTGATCTGTTCATGAAAAGGGTCGAACAGAATGGCGAATGGACCC 2235887
Query 75759 TTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCC 75818
| |||| |||| |||| || || || |||||| || || || ||||||| |
Sbjct 2235888 TGTTCTCTCCAAGTGAGGCTCCTGGCCTTGCCGACGTCTACGGCGATGAATTTGAAGAAC 2235947
Query 75819 TCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCCGCCGAT 75874
| ||| || || ||| |||| ||| | || ||| || | |||| |
Sbjct 2235948 TGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCCCAAAAG 2236003
Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934
||||| | || || ||| | ||||||| || || || || |||| ||| | || |||
Sbjct 2236004 CTTTGGTACGCCATCCTCGAGGCACAGACAGAAACCGGTACTCCATTCATGTTGTATAAG 2236063
Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994
||||||||||||||||| | ||||| ||||| ||||| || || ||| || |||
Sbjct 2236064 GATGCTTGTAACAAGAAAACCAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACCTT 2236123
Query 75995 TGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCA 76054
|| || ||| | ||||| | || || || ||||| || || ||||| ||
Sbjct 2236124 TGTTGTGAGATTGTTGAGTATTCTTCCCCAGAAGAAACTGCTGTCTGTAACTTGGCTTCT 2236183
Query 76055 ATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTG-----ATTATGAAA 76106
|| || |||||| | ||| | || || ||| |||| ||| | | |||||
Sbjct 2236184 ATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACT--CACTGTTGGTACAACTTTGAAA 2236241
Query 76107 AACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATT 76166
| || ||||| ||||| ||| | || || || | ||| || | || |||||||| |
Sbjct 2236242 AGCTGCATGACATCACGAAGGTGGTCACTCGTAACTTGAACAGAATTATCGACAGAAACT 2236301
Query 76167 TTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGG 76223
|| || ||| ||| || | || || || ||||| | ||||| |||| | | |
Sbjct 2236302 ACTACCCGGTTCCAGAGGCTAGGAGA---TCCAACATGCGTAATAGACCAATTGCTGTTG 2236358
Query 76224 GTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAG 76283
||||||||||| | || |||| || || || | | |||||||||| || |
Sbjct 2236359 GTGTTCAAGGTTTAGCTGATGCTTTCATGAAGTTGAGAATCCCATTTGATTCTCCAGAGG 2236418
Query 76284 CCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTT 76343
| ||| | | ||| | || || ||||| || || || | | || |||| ||
Sbjct 2236419 CTAAGCAACTTAATATCCAGATTTTCGAAACTATCTACCATGGAGCCTTGGAAGCCTCGA 2236478
Query 76344 GTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAG 76403
| ||||| || | | |||| | || || || ||| | |||||||| || || || |
Sbjct 2236479 GCGAATTAGCCGTTGAGGAAGGAGCTTACGAAACCTTTCAAGGTTCTCCAGCATCTCAGG 2236538
Query 76404 GGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGT 76461
| | | |||| |||| ||||||| ||| | || | | | || |||||
Sbjct 2236539 GTATTTTGCAGTATGATTTGTGGGA--CAAAAAGCCCTCTGAGCTGTGGGAATGGGAGTC 2236596
Query 76462 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521
||||| | || | || |||||| | ||| ||| | | ||||| |||||
Sbjct 2236597 ACTCAAAGCCAAGATTATTTCGACAGGTCTTAGAAACTCGCTTCTAGTTGCACCTATGCC 2236656
Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581
|| || || || | || || |||||| | || || || || ||||| || || | ||
Sbjct 2236657 TACTGCTTCAACTTCCCAGATTTTGGGTTACAACGAGTGTTTCGAACCTTATACTTCTAA 2236716
Query 76582 CATCTAC 76588
|||||||
Sbjct 2236717 CATCTAC 2236723
>seq2
Length=2687137
Score = 95.1 bits (104), Expect = 1e-14
Identities = 380/589 (65%), Gaps = 27/589 (5%)
Strand=Plus/Minus
Query 64655 TCTTCCCCCTGAAGTATCCACAAC-TCTGGGAACTCTATAAAAAGGCTCAAATGAGCAAT 64713
||||||| |||| |||| || || ||||| || | || ||| |||| || | |
Sbjct 443586 TCTTCCCTTTGAAATATC-ACGACATCTGGCAAATGTACAAACAGGCCGAAGCTTCCTTT 443528
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
|||||||| || ||| | || ||| || ||| | | |||||||| | | ||||
Sbjct 443527 TGGACTGCCGAGGAAATAGACTTGGGAAAGGATTTGCATGACTGGAATAATCGTATGAAC 443468
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACA-TCCTGGCATTCTTTGCTGGGTCCGATGGAAT 64829
|| ||||| ||| | || || || | | || || || ||||||| || ||||| ||
Sbjct 443467 GACAATGAGAAGTATTTTATCTC-TAGAGTTCTTGCCTTTTTTGCTGCCTCTGATGGTAT 443409
Query 64830 TGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
||| ||| ||| | | || || | ||| || || | |||||| |
Sbjct 443408 TGTCAATGAAAATTTGGTGGAAAACTTCAGCGCTGAGGTTCAACTTCCCGAAGCAAAATG 443349
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
|| |||| | |||| | || ||| | | | || |||||| || ||| ||||
Sbjct 443348 TTTTTACGGTTTTCAAATC-ATGATGGAGAACATCCACTCCGAAACTTACTCATTGTTGA 443290
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAG-----TTATTTGAAGCCATCCA 65003
|||| | ||||| || ||| | |||||| | | || || | |||||| |
Sbjct 443289 TTGATACTTACATCAAAGATCCA-----AAAGAATCCGAATTCTTGTTCAATGCCATCGA 443235
Query 65004 AACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC----ACAA 65059
|| | |||||||| | | ||||| | ||||| |||| |||| ||| | || |
Sbjct 443234 GACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTGCCGATGACGA 443175
Query 65060 AGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCT 65119
| | | ||||| || || | |||| || || ||| || ||||||||||| |
Sbjct 443174 TGCTTTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTTT 443119
Query 65120 CCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCT 65179
| || || ||| |||| | |||||||| ||| | ||||| |||||||| | ||
Sbjct 443118 CGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGTTTGACCT 443059
Query 65180 TCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|||| ||||| ||||||| | ||||||| || | ||| || |||||
Sbjct 443058 TCTCCAATGAGCTTATTTGCAGAGATGAAGGATTACACACCGACTTTGC 443010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569517971680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |