Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 230 3e-55 seq2 95.1 1e-14 >seq1 Length=3325186 Score = 230 bits (254), Expect = 3e-55 Identities = 891/1387 (64%), Gaps = 41/1387 (3%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||||| ||||| ||||| || || || || ||||||| || | || || ||| || Sbjct 2235353 ATGCGTGTCGCTATCGGTATTCATGGTGATGACATTGCAAGGGTTATTGAAACCTACAAC 2235412 Query 75287 AAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 ||| || | |||| |||| |||||| | || || || || || |||||||| || Sbjct 2235413 TTTATGAGTCAGAAGTAT-TTCACTCACGCCTCTCCTACTCTGTTTAACGCTGGTACCCC 2235471 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || || ||||| || ||| | | |||| ||| ||||| || | ||||| Sbjct 2235472 TCACCCACAAATGTCGTCATGTTTCTTAGTTGCCATGCGGGATGACTCGATTGAAGGTAT 2235531 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 |||| ||| | | ||| ||||| ||| || || ||||| || ||||| |||| Sbjct 2235532 TTATGATACTTTGAAGGAATGTGCTTTAATTTCCAAAACTGCTGGTGGAATTGGTTTGCA 2235591 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 ||| ||| || | | |||| ||| ||| || || || ||| || | || Sbjct 2235592 CATTCATAATATTCGTGCCACAGGATCCTACATTGCTGGTACTAACGGTACTTCGAACGG 2235651 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 ||||||||||||| | | || || ||| ||| || || ||||| ||||| || | Sbjct 2235652 TATTATTCCAATGGTGAGAGTTTTCAACAACACCGCTCGTTATGTTGATCAA---GGTGG 2235708 Query 75586 TCGCAAG-----GGGTCCA-TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGA 75639 | |||| ||| || | || | |||||||||||||||||||| || ||| | | Sbjct 2235709 TAACAAGCGCCCTGGTGCATTTGCTTTGTACTTGGAACCATGGCATGCGGACATCTTCGC 2235768 Query 75640 GTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTT 75698 || |||| | || ||||| || | || || || | | |||||||| || Sbjct 2235769 CTTTATTGACATTCGTAAGAACCATGGAAAAGAGGA-AATCAGAGCCAGAGATCTATTCC 2235827 Query 75699 CATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTC 75758 | | || ||||| || || || |||||||| |||| || || ||| ||||| | | Sbjct 2235828 CGGCTCTATGGATCCCTGATCTGTTCATGAAAAGGGTCGAACAGAATGGCGAATGGACCC 2235887 Query 75759 TTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCC 75818 | |||| |||| |||| || || || |||||| || || || ||||||| | Sbjct 2235888 TGTTCTCTCCAAGTGAGGCTCCTGGCCTTGCCGACGTCTACGGCGATGAATTTGAAGAAC 2235947 Query 75819 TCTACACAAAGTATGAAGAGGAGGGTAG----AGCCAATGCGACTGTACCAGCCGCCGAT 75874 | ||| || || ||| |||| ||| | || ||| || | |||| | Sbjct 2235948 TGTACGAAAGATACGAAAAGGAAGGTCGTGGAAGACAA----ACCATCAAAGCCCAAAAG 2236003 Query 75875 GTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAG 75934 ||||| | || || ||| | ||||||| || || || || |||| ||| | || ||| Sbjct 2236004 CTTTGGTACGCCATCCTCGAGGCACAGACAGAAACCGGTACTCCATTCATGTTGTATAAG 2236063 Query 75935 GATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTT 75994 ||||||||||||||||| | ||||| ||||| ||||| || || ||| || ||| Sbjct 2236064 GATGCTTGTAACAAGAAAACCAACCAGAAGAACTTGGGTGTCATTAAATCCTCTAACCTT 2236123 Query 75995 TGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCA 76054 || || ||| | ||||| | || || || ||||| || || ||||| || Sbjct 2236124 TGTTGTGAGATTGTTGAGTATTCTTCCCCAGAAGAAACTGCTGTCTGTAACTTGGCTTCT 2236183 Query 76055 ATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTG-----ATTATGAAA 76106 || || |||||| | ||| | || || ||| |||| ||| | | ||||| Sbjct 2236184 ATTGCTCTTCCAGCCTTTGTTGAAACCGATGATACT--CACTGTTGGTACAACTTTGAAA 2236241 Query 76107 AACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATT 76166 | || ||||| ||||| ||| | || || || | ||| || | || |||||||| | Sbjct 2236242 AGCTGCATGACATCACGAAGGTGGTCACTCGTAACTTGAACAGAATTATCGACAGAAACT 2236301 Query 76167 TTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGG 76223 || || ||| ||| || | || || || ||||| | ||||| |||| | | | Sbjct 2236302 ACTACCCGGTTCCAGAGGCTAGGAGA---TCCAACATGCGTAATAGACCAATTGCTGTTG 2236358 Query 76224 GTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAG 76283 ||||||||||| | || |||| || || || | | |||||||||| || | Sbjct 2236359 GTGTTCAAGGTTTAGCTGATGCTTTCATGAAGTTGAGAATCCCATTTGATTCTCCAGAGG 2236418 Query 76284 CCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTT 76343 | ||| | | ||| | || || ||||| || || || | | || |||| || Sbjct 2236419 CTAAGCAACTTAATATCCAGATTTTCGAAACTATCTACCATGGAGCCTTGGAAGCCTCGA 2236478 Query 76344 GTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAG 76403 | ||||| || | | |||| | || || || ||| | |||||||| || || || | Sbjct 2236479 GCGAATTAGCCGTTGAGGAAGGAGCTTACGAAACCTTTCAAGGTTCTCCAGCATCTCAGG 2236538 Query 76404 GGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGGATGT 76461 | | | |||| |||| ||||||| ||| | || | | | || ||||| Sbjct 2236539 GTATTTTGCAGTATGATTTGTGGGA--CAAAAAGCCCTCTGAGCTGTGGGAATGGGAGTC 2236596 Query 76462 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 76521 ||||| | || | || |||||| | ||| ||| | | ||||| ||||| Sbjct 2236597 ACTCAAAGCCAAGATTATTTCGACAGGTCTTAGAAACTCGCTTCTAGTTGCACCTATGCC 2236656 Query 76522 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAA 76581 || || || || | || || |||||| | || || || || ||||| || || | || Sbjct 2236657 TACTGCTTCAACTTCCCAGATTTTGGGTTACAACGAGTGTTTCGAACCTTATACTTCTAA 2236716 Query 76582 CATCTAC 76588 ||||||| Sbjct 2236717 CATCTAC 2236723 >seq2 Length=2687137 Score = 95.1 bits (104), Expect = 1e-14 Identities = 380/589 (65%), Gaps = 27/589 (5%) Strand=Plus/Minus Query 64655 TCTTCCCCCTGAAGTATCCACAAC-TCTGGGAACTCTATAAAAAGGCTCAAATGAGCAAT 64713 ||||||| |||| |||| || || ||||| || | || ||| |||| || | | Sbjct 443586 TCTTCCCTTTGAAATATC-ACGACATCTGGCAAATGTACAAACAGGCCGAAGCTTCCTTT 443528 Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 |||||||| || ||| | || ||| || ||| | | |||||||| | | |||| Sbjct 443527 TGGACTGCCGAGGAAATAGACTTGGGAAAGGATTTGCATGACTGGAATAATCGTATGAAC 443468 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACA-TCCTGGCATTCTTTGCTGGGTCCGATGGAAT 64829 || ||||| ||| | || || || | | || || || ||||||| || ||||| || Sbjct 443467 GACAATGAGAAGTATTTTATCTC-TAGAGTTCTTGCCTTTTTTGCTGCCTCTGATGGTAT 443409 Query 64830 TGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 ||| ||| ||| | | || || | ||| || || | |||||| | Sbjct 443408 TGTCAATGAAAATTTGGTGGAAAACTTCAGCGCTGAGGTTCAACTTCCCGAAGCAAAATG 443349 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 || |||| | |||| | || ||| | | | || |||||| || ||| |||| Sbjct 443348 TTTTTACGGTTTTCAAATC-ATGATGGAGAACATCCACTCCGAAACTTACTCATTGTTGA 443290 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAG-----TTATTTGAAGCCATCCA 65003 |||| | ||||| || ||| | |||||| | | || || | |||||| | Sbjct 443289 TTGATACTTACATCAAAGATCCA-----AAAGAATCCGAATTCTTGTTCAATGCCATCGA 443235 Query 65004 AACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC----ACAA 65059 || | |||||||| | | ||||| | ||||| |||| |||| ||| | || | Sbjct 443234 GACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTGCCGATGACGA 443175 Query 65060 AGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCT 65119 | | | ||||| || || | |||| || || ||| || ||||||||||| | Sbjct 443174 TGCTTTG----TTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATCTTCTTTT 443119 Query 65120 CCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCT 65179 | || || ||| |||| | |||||||| ||| | ||||| |||||||| | || Sbjct 443118 CGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGTTTGACCT 443059 Query 65180 TCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 |||| ||||| ||||||| | ||||||| || | ||| || ||||| Sbjct 443058 TCTCCAATGAGCTTATTTGCAGAGATGAAGGATTACACACCGACTTTGC 443010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569517971680