Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 8e-33
seq2 145 1e-29
seq4 134 2e-26
>seq3
Length=1828518
Score = 156 bits (172), Expect = 8e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| ||| |||| ||||| |||| ||| || || || ||||| ||
Sbjct 868963 ACCACCTCTCAATCTAAGGACCAAGTGCAAGGTAGACTCCTTTTGGATGTTGTAGTCAGA 868904
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
|| |||||| ||| || ||||| || || ||||| || | | |||||| ||||||||
Sbjct 868903 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAGACGCTGTTGGTCAGGAGG 868844
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
||||| || || || || || |||| || | || |||||| ||||||||||| ||
Sbjct 868843 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTGTCGGAAGACTCCAC 868784
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| | || ||||| ||||| || || || ||||| || |||||||||||
Sbjct 868783 CTCCAAGGTGATAGTCTTACCGGTAAGGGTCTTTACGAAAATTTGCATTTT 868733
>seq2
Length=2687137
Score = 145 bits (160), Expect = 1e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||||| || ||||| ||||| |||| ||| || || || ||||||
Sbjct 1169891 ATACCACCTCTCAATCTCAGAACCAGGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCG 1169950
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | |||||| || || ||||| || || |||||||| || | ||||| ||||||
Sbjct 1169951 GACAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCAGGA 1170010
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| || |||| || | || || || ||||| |||||
Sbjct 1170011 GGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCG 1170070
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| | || || || ||||| |||| || || || || || ||||||||
Sbjct 1170071 ACTTCCAAGGTAATGGTCTTACCGGTTAAGGTCTTGACGAAAATCTGCATTTT 1170123
>seq4
Length=1577441
Score = 134 bits (148), Expect = 2e-26
Identities = 173/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||||||||| |||| || |||| || | || | || || ||| |||
Sbjct 1240382 ATTTGCATACCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTA 1240441
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | ||||| || || ||||| || || ||||| ||||| | || |||
Sbjct 1240442 TAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGA 1240501
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|||||||| || ||||| || || || || || | || | || ||| || || ||
Sbjct 1240502 TCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAT 1240561
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||| || || ||||| ||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct 1240562 GACTCCACCTCAAGAGTGATAGTCTTACCTGTTAGGGTTTTCACAAAAATCTGCATTTT 1240620
Score = 105 bits (116), Expect = 1e-17
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||||||||| |||| || |||| || | || | || || ||| |||
Sbjct 1239926 ATTTGCATACCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTA 1239985
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | ||||| || || ||||| || || ||||| ||||| | || |||
Sbjct 1239986 TAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGA 1240045
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|||||||| || ||||| || || || || || | || | || ||| || || ||
Sbjct 1240046 TCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAT 1240105
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || ||||| || || |||| || || || || ||||||||
Sbjct 1240106 GACTCCACCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 1240161
Score = 105 bits (116), Expect = 1e-17
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| ||||||||||| |||| || |||| || | || | || || ||| |||
Sbjct 1240154 ATTTGCATACCACCTCTTAATCTCAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTA 1240213
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || | ||||| || || ||||| || || ||||| ||||| | || |||
Sbjct 1240214 TAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACGTTGCTGA 1240273
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|||||||| || ||||| || || || || || | || | || ||| || || ||
Sbjct 1240274 TCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCTGAT 1240333
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || ||||| || || |||| || || || || ||||||||
Sbjct 1240334 GACTCCACCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTGCAT 1240389
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| |||||||| || | ||||| || || ||||| || || ||||| ||||| |
Sbjct 1239751 AATGTTATAGTCAGAAAGAGTTCTGCCGTCTTCCAATTGCTTACCTGCAAAGATTAAACG 1239810
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
|| ||||||||||| || ||||| || || || || || | || | || ||| ||
Sbjct 1239811 TTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGT 1239870
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|| || ||||| || || || || ||||| || || |||| || || || || |||||
Sbjct 1239871 GTCTGATGACTCCACCTCGAGGGTAATAGTCTTGCCGGTTAAGGTCTTGACGAAGATTTG 1239930
Query 193358 CAT 193360
|||
Sbjct 1239931 CAT 1239933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654276297520
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