Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=2687137 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/224 (71%), Gaps = 12/224 (5%) Strand=Plus/Plus Query 51831 ACACTTGAAGTTGGAGACTTGGTTAAAAGACAA-TTGATGGATGGTGATGATGTACTATT 51889 || ||| || |||||||| | || ||||||| |||| ||||||||| | ||| || || Sbjct 640804 ACGCTTCAAATTGGAGACATCGTGGAAAGACATCTTGA-GGATGGTGACGTTGTCCTTTT 640862 Query 51890 AAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACC 51949 |||||||| || | | |||| | ||| || | | | | |||||||| || Sbjct 640863 CAATAGGCAGCCTTCTTTGCATAGACTTTCCATTCTCTCTCATTTTGCTAAAATTCGTCC 640922 Query 51950 AGTAAAAACATTTA----AAATGAATTTGGCTATG-ACTAAAGCATATAATGCTGATTTT 52004 | ||| |||| |||||||| || |||| ||| |||| ||||| |||||| Sbjct 640923 TTGGAGAACGTTTAGGCTAAATGAATGTG--TATGCACTC---CATACAATGCCGATTTT 640977 Query 52005 GATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGC 52048 ||||| || ||||||||||||||||| || ||| || | | ||| Sbjct 640978 GATGGTGACGAAATGAATTTACATGTCCCACAAACAGAAGAAGC 641021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177512663080